LOCUS BC039597 789 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens selenoprotein W, 1, mRNA (cDNA clone MGC:48860 IMAGE:6015153), complete cds. ACCESSION BC039597 VERSION BC039597.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 789) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 789) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 84 Row: n Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 42544245. FEATURES Location/Qualifiers source 1..789 /db_xref="H-InvDB:HIT000095834" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:48860 IMAGE:6015153" /tissue_type="Testis, embryonal carcinoma" /clone_lib="NIH_MGC_92" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..789 /gene="SEPW1" /gene_synonym="selW" /db_xref="GeneID:6415" /db_xref="HGNC:HGNC:10752" /db_xref="MIM:603235" CDS 70..333 /gene="SEPW1" /gene_synonym="selW" /codon_start=1 /transl_except=(pos:106..108,aa:Sec) /product="selenoprotein W, 1" /protein_id="AAH39597.1" /db_xref="GeneID:6415" /db_xref="HGNC:HGNC:10752" /db_xref="MIM:603235" /translation="MALAVRVVYCGAUGYKSKYLQLKKKLEDEFPGRLDICGEGTPQA TGFFEVMVAGKLIHSKKKGDGYVDTESKFLKLVAAIKAALAQG" BASE COUNT 195 a 201 c 216 g 177 t ORIGIN 1 agcgcgtcca ggtgggaggt tagtgtggcc cgggcgtccg ctcctcagcg gatgtggcag 61 ccccgagcca tggctctcgc cgtccgagtc gtttattgtg gcgcttgagg ctacaagtcc 121 aagtatcttc agctcaagaa gaagttagaa gatgagttcc ccggccgcct ggacatctgc 181 ggcgagggaa ctccccaggc caccgggttc tttgaagtga tggtagccgg gaagttgatt 241 cactctaaga agaaaggcga tggctacgtg gacacagaaa gcaagtttct gaagttggtg 301 gccgccatca aagccgcctt ggctcagggc taatgcgccc tgaaggcaga gtccagggac 361 cttgacccag cccctctcag cagacgcttc atgataggaa ggactgaaaa gtcttgtgga 421 cacctggtct ttccctgatg ttctcgtggc tgctgttggg ggcagagatt gacgcccccg 481 gtctttgcct ctgagcggga gagtctgtgt gtatgtgtct tccccggaat ccacaccacc 541 ccaccctcct cctgtcccgt ggtttcatca tatctctttg cataccccat gtcttcccca 601 gttgtcccct ggagtttggg gggacatccc gcctcaggca tccttctcaa ggggaagcca 661 agagaggcat caggatgggt gggtttctga ttgtggcaac gtttgcaacc gttcacgatt 721 caataaatat tggatgaatt taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 781 aaaaaaaga //