LOCUS BC039556 567 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens chromosome 6 open reading frame 173, mRNA (cDNA clone
MGC:50690 IMAGE:4452583), complete cds.
ACCESSION BC039556
VERSION BC039556.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 567)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 567)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC039556.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 88 Row: a Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 60302882.
FEATURES Location/Qualifiers
source 1..567
/db_xref="H-InvDB:HIT000095817"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:50690 IMAGE:4452583"
/tissue_type="Kidney, hypernephroma"
/clone_lib="NIH_MGC_89"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..567
/gene="C6orf173"
/gene_synonym="CUG2"
/gene_synonym="DKFZp686L1553"
/db_xref="GeneID:387103"
/db_xref="HGNC:HGNC:21488"
CDS 168..434
/gene="C6orf173"
/gene_synonym="CUG2"
/gene_synonym="DKFZp686L1553"
/codon_start=1
/product="chromosome 6 open reading frame 173"
/protein_id="AAH39556.1"
/db_xref="GeneID:387103"
/db_xref="HGNC:HGNC:21488"
/translation="MALSTIVSQRKQIKRKAPRGFLKRVFKRKKPQLRLEKSGDLLVH
LNCLLFVHRLAEESRTNACASKCRVINKEHVLAAAKVILKKSRG"
BASE COUNT 170 a 106 c 150 g 141 t
ORIGIN
1 ccgggcgcgt tccgttggcg gcggattcga acgttcggac tgaggttttt ctgcctgaag
61 aagcgtcata cggaccggat tgttttcgct ggcccagtgt ccccggagct tgtgtgcgat
121 acagagagca cctcggaagc tgaggcagct ggtacttgac agagaggatg gcgctgtcga
181 ccatagtctc ccagaggaag cagataaagc ggaaggctcc ccgtggcttt ctaaagcgag
241 tcttcaagcg aaagaagcct caacttcgtc tggagaaaag tggtgactta ttggtccatc
301 tgaactgttt actgtttgtt catcgattag cagaagagtc caggacaaac gcttgtgcga
361 gtaaatgtag agtcattaac aaggagcatg tactggccgc agcaaaggta attctaaaga
421 agagcagagg ttagaagtca aagaacatat tcttgaaagt tatgatgcat tcttttgggt
481 ggtaacagat cataaagaca ttttttacac atcagttaat atgggattat taaatattgg
541 ctataagtaa aaaaaaaaaa aaaaaaa
//