LOCUS BC039428 988 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens peroxiredoxin 2, mRNA (cDNA clone MGC:44699
IMAGE:5303023), complete cds.
ACCESSION BC039428
VERSION BC039428.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 988)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 988)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 77 Row: k Column: 8.
FEATURES Location/Qualifiers
source 1..988
/db_xref="H-InvDB:HIT000052200"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:44699 IMAGE:5303023"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..988
/gene="PRDX2"
/gene_synonym="MGC4104"
/gene_synonym="NKEFB"
/gene_synonym="PRP"
/gene_synonym="PRXII"
/gene_synonym="TSA"
/db_xref="GeneID:7001"
/db_xref="HGNC:HGNC:9353"
/db_xref="MIM:600538"
CDS 120..716
/gene="PRDX2"
/gene_synonym="MGC4104"
/gene_synonym="NKEFB"
/gene_synonym="PRP"
/gene_synonym="PRXII"
/gene_synonym="TSA"
/codon_start=1
/product="peroxiredoxin 2"
/protein_id="AAH39428.1"
/db_xref="GeneID:7001"
/db_xref="HGNC:HGNC:9353"
/db_xref="MIM:600538"
/translation="MASGNARIGKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYP
LDFTFVCPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIP
LLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQ
AFQYTDEHGEVCPAGWKPGSDTIKPNVDDSKEYFSKHN"
BASE COUNT 215 a 286 c 281 g 206 t
ORIGIN
1 gtcttggttc gggccgggca taaaaggctt cgcggcccag ggctcacttg gcgctgagaa
61 cgcgggtcca cgcgtgtgat cgtccgtgcg tctagccttt gcccacgcag ctttcagtca
121 tggcctccgg taacgcgcgc atcggaaagc cagcccctga cttcaaggcc acagcggtgg
181 ttgatggcgc cttcaaagag gtgaagctgt cggactacaa agggaagtac gtggtcctct
241 ttttctaccc tctggacttc acttttgtgt gccccaccga gatcatcgcg ttcagcaacc
301 gtgcagagga cttccgcaag ctgggctgtg aagtgctggg cgtctcggtg gactctcagt
361 tcacccacct ggcttggatc aacacccccc ggaaagaggg aggcttgggc cccctgaaca
421 tccccctgct tgctgacgtg accagacgct tgtctgagga ttacggcgtg ctgaaaacag
481 atgagggcat tgcctacagg ggcctcttta tcatcgatgg caagggtgtc cttcgccaga
541 tcactgttaa tgatttgcct gtgggacgct ccgtggatga ggctctgcgg ctggtccagg
601 ccttccagta cacagacgag catggggaag tttgtcccgc tggctggaag cctggcagtg
661 acacgattaa gcccaacgtg gatgacagca aggaatattt ctccaaacac aattaggctg
721 gctaacggat agtgagcttg tgcccctgcc taggtgcctg tgctgggtgt ccacctgtgc
781 ccccacctgg gtgcgctatg ctgacccagg aaaggccaga cctgcccctc caaactccac
841 agtatgggac cctggagggc taggctaagg ccttctcatg cctccaccta gaagctgaat
901 agtgacgccc tcccccaagc ccacccagcc gcacacaggc ctagaggtaa ccaataaagt
961 attagggaaa ggtaaaaaaa aaaaaaaa
//