LOCUS BC039369 1596 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens chromosome 12 open reading frame 56, mRNA (cDNA clone
IMAGE:5271073), partial cds.
ACCESSION BC039369
VERSION BC039369.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1596)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1596)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 74 Row: m Column: 15.
FEATURES Location/Qualifiers
source 1..1596
/db_xref="H-InvDB:HIT000095637"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5271073"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..1596
/gene="C12orf56"
/db_xref="GeneID:115749"
/db_xref="HGNC:HGNC:26967"
CDS <1..1337
/gene="C12orf56"
/codon_start=3
/product="C12orf56 protein"
/protein_id="AAH39369.1"
/db_xref="GeneID:115749"
/db_xref="HGNC:HGNC:26967"
/translation="VFLRRHLPPEVYDAVRAYEPCIVVSNSENHILKYVVLSDRLVYL
TENPPKSIRRVVALRDVVAIDLIDDYPEFLSSPDREISQHIRIIYSSTVLKKECKKSN
SVRKFLFPFHHTKANNKKVKEEKNGLAFWRSKESRSLKESPLRSEEKIKHFSQLKSEL
FLKDNSLRRILSLLMELKVAAQKNFILKRLFWKTSDLFYFIVNKLHEYLPESRDKNAL
QNQSQRVDELVACIEIIQTLVLMFRETETESSRLNTLAAKKGALFNLLVILISEPQIP
KSCPVFDIQLVADSALVRMSFDAELQKLILEYTNTATALLYEILLVFQQGNLGLGSTK
FAISWIMSFLQSCPPIITFVASIVKQVVRGLSASFQLLSPCQAVLLYQQFYILKSCLR
HSRTLAEYIRNNYREEFRYFIHMPALQKRLPLCYPITQPTIQLFHEVLKLVE"
BASE COUNT 523 a 316 c 307 g 450 t
ORIGIN
1 tggtgttcct gcggcggcat ctgccgcccg aggtctacga cgcggtccgc gcctacgagc
61 catgcatcgt ggtgtccaac tctgagaacc acatcctcaa gtatgtggtg ctaagcgacc
121 ggctcgtcta cctaaccgag aacccgccca agtccatccg gcgggtagtg gctctgcggg
181 acgtcgtggc cattgacctg attgatgatt acccggaatt tttgagttcg ccagatagag
241 aaatcagcca acacattcgt atcatctatt cttcaaccgt tttgaaaaaa gagtgtaaaa
301 agtcaaacag tgtcaggaaa ttcctatttc catttcatca tactaaagct aacaacaaga
361 aagtcaagga agaaaagaac ggccttgcct tttggagaag caaagagtcc agaagtctga
421 aagaatctcc tctcaggtct gaggagaaaa ttaagcactt cagtcaactt aaatctgaac
481 tttttcttaa agacaattct ttgaggagga tactttcttt acttatggaa cttaaagtag
541 cagcccagaa aaacttcatt ctgaaaaggc ttttctggaa gaccagtgac cttttctatt
601 tcatagtaaa caaacttcat gagtacttgc cggagtctag ggataagaat gcactacaaa
661 atcaaagcca aagggttgat gagctggtgg catgcattga aattatacag accctagtat
721 tgatgttcag agaaacagaa accgagtcat cacgcctgaa cacattggca gctaagaagg
781 gagcactatt taatctcttg gtaattttaa ttagtgagcc tcagattcca aaatcttgtc
841 ctgtgtttga tatccagttg gtggctgatt cagctttagt cagaatgtct tttgacgctg
901 agttacagaa gcttattctg gagtatacaa atactgctac agcactttta tatgagatac
961 ttcttgtctt tcagcaggga aatctcggat tgggatccac aaagtttgct attagctgga
1021 taatgtcctt tctacaaagc tgtcctccca tcattacttt tgtggccagt attgtgaaac
1081 aagtggtgag gggtctttca gcttcatttc agctgctaag tccctgccaa gcagttctgt
1141 tgtaccagca attttacatc ctcaagagct gtctgcggca cagcaggact ctagctgagt
1201 atattaggaa taactacaga gaagaattca ggtactttat tcacatgcca gccttgcaga
1261 aaaggctccc attgtgttac cccatcactc aacctaccat tcaacttttt catgaagttc
1321 tgaaattggt tgaatagaaa caaacaatgt acgcaatgtt aataagagta taaaatgtta
1381 atcaagagtc aacttgatat tcacgagaaa cattttttta tttgtttaat atctggctat
1441 ctctgagtcc tataaacaaa gattttaatt gaatgttcca tcaatacctc tctatgagaa
1501 gtttaaaatt ttaaaaaata aatttgattt attaaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 aaaaaaaaaa aaaaaaaaat taaaaaaaaa aaaaaa
//