LOCUS BC039349 2230 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens chromosome 6 open reading frame 146, mRNA (cDNA clone
MGC:43581 IMAGE:5269651), complete cds.
ACCESSION BC039349
VERSION BC039349.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2230)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2230)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 74 Row: i Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27734860.
FEATURES Location/Qualifiers
source 1..2230
/db_xref="H-InvDB:HIT000052197"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:43581 IMAGE:5269651"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2230
/gene="C6orf146"
/gene_synonym="MGC43581"
/db_xref="GeneID:222826"
/db_xref="HGNC:HGNC:21362"
CDS 341..1867
/gene="C6orf146"
/gene_synonym="MGC43581"
/codon_start=1
/product="chromosome 6 open reading frame 146"
/protein_id="AAH39349.1"
/db_xref="GeneID:222826"
/db_xref="HGNC:HGNC:21362"
/translation="MGRRNENCANSLRVSNISQENLSHWNLDSEVPVSENKNLPAGRD
GAAGGKINKNYLEIPVEQLMLEPNLSVHSQKSTQNSKQGIFQLWNCPLNEGSTIEKRE
FKKSSVETGFNVINHPIRVFTLNHPLTIASVDKQVGPYPGLPMPLGLCWPYADGDFFK
NRNEIHVSSCSTIENNDGETLPAPNWNLKHGNSSVEENFTDESDLSENEKTNDTLLSY
FKKVDLNLKPETIKNVEEPFTEEPNEVFPYPDFLPPPFSALDLHNLALSKSDNWKVTV
DPAETSVEHLITRLLELERLQHMTIQKERPRLQTTFCTPAVTERPSSSKATPKVRQPK
LCDSLSLQIPCVDKSQEKSKNNSGSCKLEQNALKRNWSNAGKYRWNSRPLSLKSSSTP
KQLIETYDKNPKSSILSPCQELSFKPTIGHTNQSMVKMISTRCLPWRSPMPVSPIPLT
FPENQKEEIKAPKRNFGTKKKLYRQNIVLNRPFSIQKLNCLSPSLIAKDKCCSPIEQK
"
BASE COUNT 726 a 504 c 454 g 546 t
ORIGIN
1 agttgccggg agacccggcc ggtggggaag cccgcggagc cgcagccccg gccccggaag
61 gtctctctgg gccccgggcc cgactcccac ccctgcgccg gcccgcgggc ttcgcaggcc
121 ctgcactgcc gaccgggctg cgctcaaggc cgccagccgc ccgccgccct ctttgtcccc
181 ccgctgcagg aaggccgcgg cagagggggc gccctccaag ccgtcagcca cgcacgcgga
241 ggcgctcggg cctcggggcg gcgcaccggg agagcacgcc ggggaggaca cgtgggcctt
301 cgcgcggatt ttaaggaaac agagcaacag ctacaacaaa atggggagaa gaaatgagaa
361 ctgtgctaac agcctacgtg tgtcaaacat ctctcaggag aacttatctc actggaattt
421 ggattcagaa gtacctgttt ctgaaaataa aaacctccca gctggaaggg atggagcagc
481 aggtggcaaa attaacaaga actatttgga aattccagtg gagcaactga tgctagaacc
541 taatttgtcg gtgcatagtc aaaaaagtac acagaatagt aaacaaggga tctttcaatt
601 atggaattgt cctcttaatg aaggaagtac catagagaag agggaattca aaaaatcttc
661 agtggaaact ggctttaatg taatcaatca tcctataagg gtcttcactc tgaaccatcc
721 attaacaatt gcttcagttg ataagcaagt tggtccttac cctggactgc caatgccatt
781 aggtctctgc tggccctatg ctgatggaga cttttttaag aacagaaatg agattcatgt
841 tagttcatgt tcaactatag aaaacaatga tggtgaaaca ttacctgctc caaattggaa
901 tttgaaacat ggaaacagca gtgtggaaga aaatttcaca gatgaaagtg atttatcaga
961 aaatgagaag acaaatgata ctttactcag ctattttaaa aaggtggacc tgaacttgaa
1021 gccagaaaca ataaaaaatg ttgaggaacc tttcaccgag gagccaaatg aagtatttcc
1081 atatcctgat tttctccctc ctcctttcag tgctctagac ttgcacaatt tagccctctc
1141 caaatctgac aattggaaag tgacagtgga ccctgcagaa acctctgttg aacacttgat
1201 aactcgttta ctggaactag aacgattaca acatatgact attcaaaaag agaggccaag
1261 actacaaacg actttctgta ctccagcagt tactgaacga ccctcttcct ccaaagctac
1321 accaaaagtg agacagccaa aactttgcga ctctttgagt cttcagatac cttgtgtaga
1381 taaaagtcaa gaaaaaagta aaaacaactc tggttcttgt aagcttgaac aaaatgcttt
1441 aaaacggaat tggagcaatg ctggcaaata tagatggaat tctagaccac tgtctctaaa
1501 aagttcttcc accccaaaac aattgattga aacttatgat aagaatccca aaagttctat
1561 tttaagtcca tgccaagaac tctcattcaa acctactatt ggccatacaa atcaatcaat
1621 ggttaaaatg atctccacaa gatgtctgcc atggaggtct ccaatgccag tttcacctat
1681 acctctgact tttcccgaaa atcagaagga agaaattaag gcaccgaaga gaaactttgg
1741 gaccaaaaag aaactttacc gacaaaatat agtgttgaat agaccattct ctattcagaa
1801 gctaaactgt ttgtcgcctt cccttattgc taaggataag tgctgctcac ccattgaaca
1861 aaaataactc ttttctttca tacatctcaa tgtgaacaca tctactctaa gaagcccaac
1921 taagatatgg ttaattattc caagacacag gtactattaa cagtccccca aaatcaccaa
1981 acagttgctt gatgtgatat ggagtagaac ttgtgaaaag cactgctgag atgtctatat
2041 ataaacccac aggcttctat actgacatat ttcacaatct gttgcatgtt gtgtttcaag
2101 taaatggttc acttggtaga ctattctatt caaaaggcta ctcttttttc agtgattgtt
2161 ttccagtata attccatcaa taaatggtat aattgaaaaa aaaaaaaaaa aaaaaaaaaa
2221 aaaaaaaaaa
//