LOCUS BC039261 3649 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens acyl-CoA synthetase short-chain family member 1, mRNA
(cDNA clone MGC:33843 IMAGE:5298849), complete cds.
ACCESSION BC039261
VERSION BC039261.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3649)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3649)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: n Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28416952.
FEATURES Location/Qualifiers
source 1..3649
/db_xref="H-InvDB:HIT000052180"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33843 IMAGE:5298849"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3649
/gene="ACSS1"
/gene_synonym="AceCS2L"
/gene_synonym="MGC33843"
/db_xref="GeneID:84532"
/db_xref="HGNC:HGNC:16091"
CDS 40..2109
/gene="ACSS1"
/gene_synonym="AceCS2L"
/gene_synonym="MGC33843"
/codon_start=1
/product="acyl-CoA synthetase short-chain family member 1"
/protein_id="AAH39261.1"
/db_xref="GeneID:84532"
/db_xref="HGNC:HGNC:16091"
/translation="MAARTLGRGVGRLLGSLRGLSGQPARPPCGVSAPRRAASGPSGS
APAVAAAAAQPGSYPALSAQAAREPAAFWGPLARDTLVWDTPYHTVWDCDFSTGKIGW
FLGGQLNVSVNCLDQHVRKSPESVALIWERDEPGTEVRITYRELLETTCRLANTLKRH
GVHRGDRVAIYMPVSPLAVAAMLACARIGAVHTVIFAGFSAESLAGRINDAKCKVVIT
FNQGLRGGRVVELKKIVDEAVKHCPTVQHVLVAHRTDNKVHMGDLDVPLEQEMAKEDP
VCAPESMGSEDMLFMLYTSGSTGMPKGIVHTQAGYLLYAALTHKLVFDHQPGDIFGCV
ADIGWITGHSYVVYGPLCNGATSVLFESTPVYPNAGRYWETVERLKINQFYGAPTAVR
LLLKYGDAWVKKYDRSSLRTLGSVGEPINCEAWEWLHRVVGDSRCTLVDTWWQTETGG
ICIAPRPSEEGAEILPAMAMRPFFGIVPVLMDEKGSVMEGSNVSGALCISQAWPGMAR
TIYGDHQRFVDAYFKAYPGYYFTGDGAYRTEGGYYQITGRMDDVINISGHRLGTAEIE
DAIADHPAVPESAVIGYPHDIKGEAAFAFIVVKDSAGDSDVVVQELKSMVATKIAKYA
VPDEILVVKRLPKTRSGKVMRRLLRKIITSEAQELGDTTTLEDPSIIAEILSVYQKCK
DKQAAAK"
BASE COUNT 774 a 942 c 1110 g 823 t
ORIGIN
1 gcactctggg agcacagaga gctcaggtag cctgcctaga tggcggcgcg caccctgggc
61 cgcggcgtcg ggaggctgct gggcagcctg cgagggctct cggggcagcc cgcgcggccg
121 ccgtgcgggg tgagcgcgcc gcgcagggcg gcctcgggac cctcgggcag cgctcccgca
181 gttgcagcag cagcagcaca gccaggctcg tatcccgcgc tgagtgcaca ggcagcccgg
241 gagccggccg ccttctgggg gcctctggcg cgggacactc tcgtgtggga caccccctac
301 cacaccgtct gggactgcga cttcagcact ggcaagatcg gctggttcct gggaggccag
361 ttaaatgtct ctgtcaactg cttggaccag catgttcgga agtcccccga gagcgttgct
421 ttgatctggg agcgcgatga gcctggaacg gaagtgagga tcacctacag ggaactactg
481 gagaccacgt gccgcctggc caacacgctg aagaggcatg gagtccaccg tggggaccgt
541 gttgccatct acatgcccgt gtccccattg gctgtggcag caatgctggc ctgtgccagg
601 atcggagctg tccacacagt catctttgct ggcttcagtg cggagtcctt ggctgggagg
661 atcaatgatg ccaagtgcaa ggtggttatc accttcaacc aaggactccg gggtgggcgc
721 gtggtggagc tgaagaaaat agtggatgag gctgtgaagc actgccccac cgtgcagcat
781 gtcctggtgg ctcacaggac agacaacaag gtccacatgg gggatctgga cgtcccgctg
841 gagcaggaaa tggccaagga ggaccctgtt tgcgccccag agagcatggg cagtgaggac
901 atgctcttca tgctgtacac ctcagggagc accggaatgc ccaagggcat cgtccatacc
961 caggcaggct acctgctcta tgccgccctg actcacaagc ttgtgtttga ccaccagcca
1021 ggtgacatct ttggctgtgt ggccgacatc ggttggatta caggacacag ctacgtggtg
1081 tatgggcctc tctgcaatgg tgccaccagc gtcctttttg agagcacccc agtttatccc
1141 aatgctggtc ggtactggga gacagtagag aggttgaaga tcaatcagtt ctatggcgcc
1201 ccaacggctg tccggctgtt gctgaaatac ggtgatgcct gggtgaagaa gtatgatcgc
1261 tcctccctgc ggaccctggg gtcagtggga gagcccatca actgtgaggc ctgggagtgg
1321 cttcacaggg tggtggggga cagcaggtgc acgctggtgg acacctggtg gcagacagaa
1381 acaggtggca tctgcatcgc accacggccc tcggaagaag gggcggaaat cctccctgcc
1441 atggcgatga ggcccttctt tggcatcgtc cccgtcctca tggatgagaa gggcagcgtc
1501 atggagggca gcaacgtctc cggggccctg tgcatctccc aggcctggcc gggcatggcc
1561 aggaccatct atggcgacca ccagcgattt gtggacgcct acttcaaggc ctacccaggc
1621 tattacttca ctggagacgg ggcttaccga actgagggcg gctattacca gatcacaggg
1681 cggatggatg atgtcatcaa catcagtggc caccggctgg ggaccgcaga gattgaggac
1741 gccatcgccg accaccctgc agtaccagaa agtgctgtca ttggctaccc ccacgacatc
1801 aaaggagaag ctgcctttgc cttcattgtg gtgaaagata gtgcgggtga ctcagatgtg
1861 gtggtgcagg agctcaagtc catggtggcc accaagatcg ccaaatatgc tgtgcctgat
1921 gagatcctgg tggtgaaacg tcttccaaaa accaggtctg ggaaggtcat gcggcggctc
1981 ctgaggaaga tcatcactag tgaggcccag gagctgggag acactaccac cttggaggac
2041 cccagcatca tcgcagagat cctgagtgtc taccagaagt gcaaggacaa gcaggctgct
2101 gctaagtgag ctggcacctt gtggggctct tgggatgggc gggcacccaa gccctggctt
2161 gtccttccca gaaggtaccc ctgaggttgg cgtcttccta cgtcccagaa gcagccccca
2221 ccccacacat gacccacacc gccctcacgt gaagctgggc tgagagccct ttctcccatc
2281 cattggaggt cccaggagtg tcacccatgg agaggctatg cgacatggct agggctggtt
2341 ctgccatctg agtttggttt cctggaatga aaaggcattg ccatctccat tcctctgccc
2401 tcttgagcca gcacaggaag gtgaggccct gggatagcgc gcctgctcag ataacacaga
2461 gctagttagc tagtagcaac cgtgttttct ccagatctgt ctagatacaa aggtcagaaa
2521 tcttattttt atacttttat attgtggaag aacagcatgc aacactcaca tgtagtgtgt
2581 ggatttactt gaacatgttc tttttaacat gtagttatga aaatctcctt ttttgcctct
2641 actggtgagg aaacatgagg atcagaggcc acatttttaa ttattgttag tgtatttgga
2701 agtctgaatt ggagatgttc gtacctctgt ctaaacagtt cccttgagaa cttccaagcc
2761 tccggcatct tttcctggtg agtgtttctc ctgtgcttgg ttgtgtataa tggagctaac
2821 tcctaagcgg tggggtgaat gtggccgcct tagttctgaa gctactccag ttatgttctg
2881 tttcttcaag ctgtgatcca gaaagatttt tgtgccccca gatgcctctt gataggagag
2941 gcaacatact ccaaatagtt gggttcttca gggaagctat tagaaactca ggtgacttgt
3001 tagagcacta acttggtcag agccaaatcc tggcaaacgc tgcctgacct tcactctgtg
3061 gttggggcag tgagaaccac tgaggtccaa tgatgagact tggaggtctg gatccagtct
3121 ctctttgttt taatgtgact taggtgctgt caacattagc aagataatgg aaatcacgac
3181 gccagtgggt gcttacctcc ctgctaggca tgcaggggct ggcggttggc aggggaagga
3241 ggcccagtga gccgggtccc ttaggggagg gagagtttgt cctctttgcc ccacagtcta
3301 cccttcaggg ccttgtggca gtgccagtgt tcggggggtg tctgggccac tgagtaccca
3361 ctcggtcgtg gttgtgctgg cctcttgggt gagtgaacct gtgaagccca ggaggtggtg
3421 ttggctgcag ggtacacaaa tactgagtgg tggtcttttg ttacaggctt agcaacaaag
3481 ctgtgccctg ggcatggggg gctgtagtgt agctacagtt gtgcgtttgt gaaatggctt
3541 agctttccat gttgctgaga ggaacctgga catggtcccg ggcatctgaa tgatctgtag
3601 gggagggagt tcaaataaag ctttattttg ttcaaaaaaa aaaaaaaaa
//