LOCUS BC039254 4181 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens WD repeat domain 47, mRNA (cDNA clone MGC:33742
IMAGE:5287954), complete cds.
ACCESSION BC039254
VERSION BC039254.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4181)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4181)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: j Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222316.
FEATURES Location/Qualifiers
source 1..4181
/db_xref="H-InvDB:HIT000052174"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33742 IMAGE:5287954"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4181
/gene="WDR47"
/gene_synonym="KIAA0893"
/db_xref="GeneID:22911"
CDS 251..2932
/gene="WDR47"
/gene_synonym="KIAA0893"
/codon_start=1
/product="WDR47 protein"
/protein_id="AAH39254.1"
/db_xref="GeneID:22911"
/translation="MTAEETVNVKEVEIIKLILDFLNSKKLHISMLALEKESGVINGL
FSDDMLFLRFRYIILKQKFLEALCVNNAMSAEDEPQHLEFTMQEAVQCLHALEEYCPS
KDDYSKLCLLLTLPRLTNHAEFKDWNPSTARVHCFEEACVMVAEFIPADRKLSEAGFK
ASNNRLFQLVMKGLLYECCVEFCQSKATGEEITESEVLLGIDLLCGNGCDDLDLSLLS
WLQNLPSSVFSCAFEQKMLNIHVDKLLKPTKAAYADLLTPLISKLSPYPSSQMRRPQS
ADAYMTRSLNPALDGLTCGLTSHDKRISDLGNKTSPMSHSFANFHYPGVQNLSRSLML
ENTECHCIYEESPERDTPVDAQRPIGSEILGQSSVSEKEPANGAQNPGPAKQEKNELR
DSTEQFQEYYRQRLRYQQHLEQKEQQRQIYQQMLLEGGVNQEDGPDQQQNLTEQFLNR
SIQKLGELNIGMDGLGNEVSALNQQCNGSKGNGSNGSSVTSFTTPPQDSSQRLTHDAS
NIHTSTPRNPGSTNHIPFLEESPCGSQISSEHSVIKPPLGDSPGSLSRSKGEEDDKSK
KQFVCINILEDTQAVRAVAFHPAGGLYAVGSNSKTLRVCAYPDVIDPSAHETPKQPVV
RFKRNKHHKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATVSGPDLEFSMHD
GTIRDLAFMEGPESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWSG
WMIASGSQDKTVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSC
MLYDIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLPIM
VVGEHKDKVIQCRWHTQDLSFLSSSADRTVTLWTYNG"
BASE COUNT 1219 a 829 c 918 g 1215 t
ORIGIN
1 tggcagtctg caagaggctg agctgaggag tcgctgggcc gggaggggcg gacgtgagaa
61 ggacggatga cgaactgatg gattgacgcg cgggcggtag gagggaggac cacgccaaac
121 ccagaccgcc gccgtcgtgc tcctgccgca gcccggagcc ggccgcttcg gggccctggc
181 cgccggcctc ccagccgcgt tctcctccgc cgctcctccg ggcttgccct ggagccctca
241 ggctatcaat atgacggctg aagaaacagt gaatgtaaaa gaggttgaaa tcattaagct
301 aattttggac ttcctgaatt caaagaagct tcacattagt atgctggccc tggagaagga
361 aagtggagtc ataaatggcc tgttttcaga tgatatgctt ttcctgaggt ttcgttatat
421 tatcctgaag cagaagtttt tagaagcttt atgtgttaac aacgcgatgt cagcagaaga
481 tgagccccag catctggaat ttaccatgca agaagctgtg caatgtttac atgctctaga
541 agaatactgt ccttctaaag atgactatag taagctctgt ttgcttttga ctttgcctcg
601 tctgaccaat catgccgagt ttaaggactg gaatcccagc accgcacgag ttcactgttt
661 tgaagaggct tgtgtcatgg ttgcagaatt catccctgct gataggaagc taagtgaagc
721 tggttttaag gctagtaaca atcgtttatt tcagcttgta atgaaaggcc tgctttatga
781 atgctgtgta gaattttgtc agagtaaagc aactggagaa gaaattacag aaagcgaagt
841 gcttcttggc atcgacctct tatgtggtaa tggttgtgat gatttggatc tgagtttact
901 gtcatggctt cagaatcttc catcttctgt cttctcttgt gcttttgaac agaaaatgct
961 taatattcat gttgacaaac ttctgaaacc tacaaaagct gcatatgctg atcttttgac
1021 tcctcttatc agcaaactct ctccctatcc atcatcccaa atgagaagac ctcaatcagc
1081 tgatgcctat atgacccgct ctctgaatcc tgctttagat ggcctcacct gtggactaac
1141 cagtcatgat aagagaattt cagaccttgg aaacaaaact tctccaatgt cacactcctt
1201 tgctaacttc cattatccag gggtacaaaa cctcagtaga agtctcatgc ttgagaatac
1261 agaatgtcac tgtatttacg aagaatcccc tgagcgtgat acacctgttg atgcacagag
1321 gcctatcggc agtgaaatct tgggccagag ttcagtttca gaaaaagagc ctgcaaatgg
1381 agcacagaat ccaggaccag ctaaacaaga aaaaaatgag cttcgagatt caacagaaca
1441 atttcaagaa tattataggc aaagattacg ctatcaacag catttagaac agaaggagca
1501 acagcggcag atataccaac agatgttgct tgaaggaggc gtgaatcagg aggatggtcc
1561 tgatcagcag cagaatctta ctgaacagtt ccttaatagg tccattcaaa agcttggtga
1621 attaaatatt ggaatggatg gccttggtaa tgaggtatca gcactcaacc agcaatgtaa
1681 tgggagcaaa ggcaatggat ctaatggttc ttctgtgact agttttacta caccacccca
1741 agactctagt cagagattaa cacatgatgc ttcaaatatt catacaagca ctcctcgtaa
1801 tcctggatca acaaatcaca taccttttct ggaggaatca ccttgtggaa gccaaatctc
1861 ttcagaacat tcggtcatta agccacctct tggagattct ccagggagtc tttcaaggtc
1921 gaaaggggaa gaggatgaca aatcaaaaaa gcagtttgtt tgtattaata tcctagaaga
1981 cacacaagct gttagagcag tggcttttca tccagctgga ggtttatatg ctgttggttc
2041 aaattcaaaa actctgagag tatgtgccta tccagatgta attgatccaa gtgcacatga
2101 gactcctaag cagccggtgg tacgttttaa aaggaataaa catcataaag gatccattta
2161 ctgtgtggcc tggagtcctt gtgggcagtt attagcaaca ggatcaaatg acaaatacgt
2221 caaagtgctg cccttcaatg cagagacttg taacgcaaca gtttcaggac cagatctgga
2281 atttagtatg catgatggaa caattagaga cttggcattt atggaaggcc cagaaagcgg
2341 aggagctatt ttaataagtg ctggagcagg ggattgtaac atttatacaa ccgattgtca
2401 aagaggacag ggcctccatg ctttgagtgg acatactggg catattttag cactttatac
2461 ctggagtggc tggatgattg catctggttc ccaagataag actgttagat tttgggatct
2521 tcgagtacca agttgtgttc gtgttgttgg cacaacattt catggaactg gcagtgcagt
2581 ggcatctgta gctgtagatc ccagtggtcg tctcttagcc acaggtcaag aagattctag
2641 ctgcatgttg tatgacataa gaggaggaag aatggtacaa agttatcatc ctcattccag
2701 tgatgttcgc tctgttcgat tctcccctgg agctcactac ttgctaacag gctcttatga
2761 tatgaaaata aaggtgacag acctacaagg ggacctcacc aagcagcttc ctatcatggt
2821 ggtgggggag cacaaggaca aagtgattca gtgcagatgg cacacccagg atctttcctt
2881 cctgtcatcc tctgcagata gaactgtcac cctctggact tacaatgggt agagcacacc
2941 gcatgtcagt ctatgcagca aaagcacaga gacttaagac tactgagttg tgaaaattac
3001 aaatctgaag aacatagtgt ccaggaaagt ggtttagcac gaagaggccc cttattacca
3061 tgtatcccac tgataggagg tgttgggtgg tgttattccg cagtgctttc agtcttccat
3121 gtgagctcgt gctgctgtga cctgctatat gtagtctcgt tgccaaagtc tgcagaagag
3181 ctcttcagtt gttggtgtgc actccaagtc aggatggaca atgtgtttac ggtttagtat
3241 tcaatgcatt ccttggtctt tgcctaaata acagttttat atgcacattg aaatggaatt
3301 atacttcaac tgtattatta aatgtaatgc aaccaagttc ctcccagatt aaacttccca
3361 ggtgttcaga attacttttg ctcttctcac gatcccatat tgtattatca cttgtcttct
3421 agaggtcaga attccataat atatgtcact caaaagttac atggttgctt tcacttaagg
3481 atcattatgg agtttaaaga tgaatgaaaa actgcttctt agtttactac atggtatagg
3541 cccttttttc ttaaacccag ggatatgatt attttgtcat ataattttgt ttcaggctaa
3601 aaggtaaatg tgtttgcttc agaaacttgt taacttcagt tttttgaatg caacaggata
3661 cctcccttcc aaactgaact gtagaagcag agcagcagca gttatgtgat gcaacacttg
3721 atggtacagt aaatttactg gcatttttct ccttaaaaat taaaatcctt gacatagacc
3781 atagcatggc ttgaaatgct atgtctgcat gataatttaa aatggaagat ttaaactttg
3841 cactccaaaa gcttatttgg atttttttct tgcactgttt tgtgtaatgc agaataatga
3901 ttttatttct acagctttgt agattctaac atttatgtat ctttattttc atattgtaca
3961 gtaattttac tttaaattat ttaaataggc tattttattt atttcaaatg cagttgtatt
4021 agttctcatt attgaactgt ctgtgcactg tatgtagcaa gcatttttca tctgttgtat
4081 acaagtggaa agggtattag aagtgtaact gtgctattat ttcaataaag acctcttgac
4141 atttaaaaaa aaaaaaaaaa aaaagaaaaa aaaaaaaaaa a
//