LOCUS BC039143 3727 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens FAT tumor suppressor homolog 2 (Drosophila), mRNA
(cDNA clone IMAGE:3859028), partial cds.
ACCESSION BC039143
VERSION BC039143.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3727)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3727)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC039143.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: d Column: 21.
FEATURES Location/Qualifiers
source 1..3727
/db_xref="H-InvDB:HIT000095540"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3859028"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_66"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..3727
/gene="FAT2"
/gene_synonym="CDHF8"
/gene_synonym="HFAT2"
/gene_synonym="MEGF1"
/db_xref="GeneID:2196"
/db_xref="HGNC:HGNC:3596"
/db_xref="MIM:604269"
CDS <1..2225
/gene="FAT2"
/gene_synonym="CDHF8"
/gene_synonym="HFAT2"
/gene_synonym="MEGF1"
/codon_start=3
/product="FAT2 protein"
/protein_id="AAH39143.1"
/db_xref="GeneID:2196"
/db_xref="HGNC:HGNC:3596"
/db_xref="MIM:604269"
/translation="TTTAGVHVYVWHVGQEALQQAIWMGFYQLTPEELVSDHWRNLQR
FLSHKLDIKRANIHLASLQPAEAVAGVDVLLVFEGHSGTFYEFQELASIITHSAKEME
HSVGVQMRSAMPMVPCQGPTCQGQICHNTVHLDPKVGPTYSTARLSILTPRHHLQRSC
SCNGTATRFSGQSYVRYRAPAARNWHIHFYLKTLQPQAILLFTNETASVSLKLASGVP
QLEYHCLGGFYGNLSSQRHVNDHEWHSILVEEMDASIRLMVDSMGNTSLVVPENCRGL
RPERHLLLGGLILLHSSSNVSQGFEGCLDAVVVNEEALDLLAPGKTVAGLLETQALTQ
CCLHSDYCSQNTCLNGGKCSWTHGAGYVCKCPPQFSGKHCEQGRENCTFAPCLEGGTC
ILSPKGASCNCPHPYTGDRCEMEARGCSEGHCLVTPEIQRGDWGQQELLIITVAVAFI
IISTVGLLFYCRRCKSHKPVAMEDPDLLARSVGVDTQAMPAIELNPLSASSCNNLNQL
EPSKASVPNELVTFGPNSKQRPVVCSVPPRLPPAAVPSHSDNEPVIKRTWSSEEMVYP
GGAMVWPPTYSRNERWEYPHSEVTQGPLPPSAHRHSTPVVMPEPNGLYGGFPFPLEME
NKRAPLPPRYSNQNLEDLMPSRPPSPRERLVAPCLNEYTAISYYHSQFRQGGGGPCLA
DGGYKGVGMRLSRAGPSYAVCEVEGAPLAGQGQPRVPPNYEGSDMVESDYGSCEEVMF
"
BASE COUNT 807 a 1061 c 1053 g 806 t
ORIGIN
1 tcaccacgac tgctggggtc catgtgtatg tgtggcatgt ggggcaggag gctctgcagc
61 aggccatatg gatgggcttc taccagctca cccccgagga gctggtgagt gaccactggc
121 ggaacctgca gaggttcctc agccataagc tggacatcaa acgggctaac attcacttgg
181 ccagcctcca gcctgcagag gccgtggctg gtgtggacgt gctcctggtc tttgaggggc
241 attctggaac cttctacgag tttcaggagc tagcatccat catcactcac tcagccaagg
301 agatggagca ttcagtgggg gttcagatgc ggtcagctat gcccatggtg ccctgccagg
361 ggccaacctg ccagggtcaa atctgccata acacagtgca tctggacccc aaggttgggc
421 ccacgtacag caccgccagg ctcagcatcc taaccccgcg gcaccacctg cagaggagct
481 gctcctgcaa tggtactgct acaaggttca gtggtcagag ctatgtgcgg tacagggccc
541 cagcggctcg gaactggcac atccatttct atctgaaaac actccagcca caggccattc
601 ttctattcac caatgaaaca gcgtccgtct ccctgaagct ggccagtgga gtgccccagc
661 tggaatacca ctgtctgggt ggtttctatg gaaacctttc ctcccagcgc catgtgaatg
721 accacgagtg gcactccatc ctggtggagg agatggacgc ttccattcgc ctgatggttg
781 acagcatggg caacacctcc cttgtggtcc cagagaactg ccgtggtctg aggcccgaaa
841 ggcacctctt gctgggcggc ctcattctgt tgcattcttc ctcgaatgtc tcccagggct
901 ttgaaggctg cctggatgct gtcgtggtca acgaagaggc tctagatctg ctggcccctg
961 gcaagacggt ggcaggcttg ctggagacac aagccctcac ccagtgctgc ctccacagtg
1021 actactgcag ccagaacaca tgcctcaatg gtgggaagtg ctcatggacc cacggggcag
1081 gctatgtctg caaatgtccc ccacagttct ctgggaagca ctgtgaacaa ggaagggaga
1141 actgtacttt tgcaccctgc ctggaaggtg gaacttgcat cctctccccc aaaggagctt
1201 cctgtaactg ccctcatcct tacacaggag acaggtgtga aatggaggcg aggggttgtt
1261 cagaaggaca ctgcctagtc actcccgaga tccaaagggg ggactggggg cagcaggagt
1321 tactgatcat cacagtggcc gtggcgttca ttatcataag cactgtcggg cttctcttct
1381 actgccgccg ttgcaagtct cacaagcctg tggccatgga ggacccagac ctcctggcca
1441 ggagtgttgg tgttgacacc caagccatgc ctgccatcga gctcaaccca ttgagtgcca
1501 gctcctgcaa caacctcaac caactggaac ccagcaaggc ctctgttcca aatgaactcg
1561 tcacatttgg acccaattct aagcaacggc cagtggtctg cagtgtgccc cccagactcc
1621 cgccagctgc ggtcccttcc cactctgaca atgagcctgt cattaagaga acctggtcca
1681 gtgaggagat ggtgtaccct ggcggagcca tggtctggcc ccctacttac tccaggaacg
1741 aacgctggga atacccccac tccgaagtga ctcagggccc tctgccgccc tcggctcacc
1801 gccactcaac cccagtcgtg atgccagagc ctaatggcct ctatgggggc ttccccttcc
1861 ccctggagat ggaaaacaag cgggcacctc tcccaccccg ttacagcaac cagaacctgg
1921 aagatctgat gccctctcgg ccccctagtc cccgggagcg cctggttgcc ccctgtctca
1981 atgagtacac ggccatcagc tactaccact cgcagttccg gcagggaggg ggagggccct
2041 gcctggcaga cgggggctac aagggggtgg gtatgcgcct cagccgagct gggccctctt
2101 atgctgtctg tgaggtggag ggggcacctc ttgcaggcca gggccagccc cgggtgcccc
2161 ccaactatga gggctctgac atggtggaga gtgattatgg cagctgtgag gaggtcatgt
2221 tctagcttcc cattcccaga gcaaggcagg cgggaggcca aggactggac ttggcttatt
2281 tcttcctgtc tcgtaggggg tgagttgagt gtggctggga gagtgggagg gaagccctca
2341 gcccaggctg ttgtcccttg aaatgtgctc ttccaatccc ccacctagtc cctgagggtg
2401 gagggaagct gaggatagag ctccagaaac agcactaggg tcccaggaga ggggcatttc
2461 tagagcagtg accctggaaa accaggaaca attgactccc ggggtgggcg agagacagga
2521 gggctccctg atctgccggc tctcagtccc cggggcagag cctgattgac tgtgctggct
2581 caacttcacc aagatgcatt ctcatacctg cccacagctc cattttggag gcaggcaggt
2641 tggtgcctga cagacaacca ctacgcgggc cgtacagagg agctctagag ggctgcgtgg
2701 catcctccta ggggctgaga ggtgagcagc aggggagcgg gcacagtccc ctctgcccct
2761 gcctcagtcg agcactcact gtgtctttgt caagtgtctg ctccacgtca ggcactgtgc
2821 tttgcaccgg ggagaaaatg gtgatggagg gcaacaagga ctccgaggag caccaccagg
2881 cctcgggccc cagaggtccc actcctcagc ctacacgcag aggaacgggc ccacctcaga
2941 gtcacaccac tggctgccag tcagggcctg ccaggagtct acacagctct gaaccttctt
3001 tgttaaagaa ttcagacctc atggaactct gggttcttca tcccaagttt cccaggcact
3061 tttggccaaa ggaaggaagg aactaattct tcattttaaa aattcttagg cactttttga
3121 ccttgctgtc tggatgagtt tcctcaatgg gatttttctt ccctagacac aaggaagtct
3181 gaactcctat ttagggccgg ttggaagcag ggagctggac cgcagtgtcc aggctggaca
3241 cctgccattg cctcctctcc attgcagacg cctgcccatc aagtattacc tgcggcgact
3301 caaccctatg catggagggt caatgtgggc acatgtctac acatgtgggt gcccatggat
3361 agtacgtgtg tacacatgtg tagagtgtat gtagccagga gtggtgggga ccagaagcct
3421 ctgtggcctt tggtgacctc accactccct cccacccagt ccctccctct ggtccactgc
3481 cttttcatat gtgttgtttc tggagacaga agtcaaaagg aagagcagtg gagccttgcc
3541 cacagggctg ctgcttcatg cgagagggag atgtgtgggc gagagccaat ttgtgtgagt
3601 ggtttgtggc tgtgtgtgtg actgtgagtg tgagtgacag atacatagtt tcattggtca
3661 tttttttttt aacaataaag tatctttttt tactgttaaa aaaaaaaaaa aaaaaaaaaa
3721 aaaaaaa
//