LOCUS BC039121 1557 bp mRNA linear HUM 09-SEP-2005 DEFINITION Homo sapiens spectrin repeat containing, nuclear envelope 1, mRNA (cDNA clone IMAGE:4830497), partial cds. ACCESSION BC039121 VERSION BC039121.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1557) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1557) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 72 Row: h Column: 16. FEATURES Location/Qualifiers source 1..1557 /db_xref="H-InvDB:HIT000095530" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4830497" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene <1..1557 /gene="SYNE1" /gene_synonym="8B" /gene_synonym="CPG2" /gene_synonym="dJ398G3.1" /gene_synonym="dJ398G3.2" /gene_synonym="KIAA0796" /gene_synonym="KIAA1262" /gene_synonym="KIAA1756" /gene_synonym="MYNE-1" /gene_synonym="MYNE1" /gene_synonym="nesprin-1" /gene_synonym="RP11-809I23.2" /gene_synonym="RP3-398G3.1" /gene_synonym="SYNE-1" /gene_synonym="SYNE-1B" /db_xref="GeneID:23345" /db_xref="MIM:608441" CDS <1..1535 /gene="SYNE1" /gene_synonym="8B" /gene_synonym="CPG2" /gene_synonym="dJ398G3.1" /gene_synonym="dJ398G3.2" /gene_synonym="KIAA0796" /gene_synonym="KIAA1262" /gene_synonym="KIAA1756" /gene_synonym="MYNE-1" /gene_synonym="MYNE1" /gene_synonym="nesprin-1" /gene_synonym="RP11-809I23.2" /gene_synonym="RP3-398G3.1" /gene_synonym="SYNE-1" /gene_synonym="SYNE-1B" /codon_start=3 /product="SYNE1 protein" /protein_id="AAH39121.1" /db_xref="GeneID:23345" /db_xref="MIM:608441" /translation="ELIDSREIGASRLSRVESLAPEVKQNTTASGCELMHTEMQALRA DWKQWEDSVFQTQSCLENLVSQMALSEQEFSGQVAQLEQALEQFSALLKTWAQQLTLL EGKNTDEEIVECWHKGQEILDALQKAEPRTEDLKSQLNELCRFSRDLSTYSGKVSGLI KEYNCLCLQASKGCQNKEQILQQRFRKAFRDFQQWLVNAKITTAKCFDIPQNISEVST SLQKIQEFLSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVTAAKEDWKNFHSN LHQKESALENLKIQMKDFEVSAEPIQDWLSKTEKMVHESSNRLYDLPAKRREQQKLQS VLEEIHCYEPQLNRLKEKAQQLWEGQAASKSFRHRVSQLSSQYLALSNLTKEKVSRLD RIVAEHNQFSLGIKELQDWMTDAIHMLDSYCHPTSDKSVLDSRTLKLEVCIFTQKYLQ PTEFVFLKISRLHPPGVMMSHSLHDKSQMLCECNAVCLGCTCQRIPESSDPGCFPKNK IK" BASE COUNT 500 a 331 c 381 g 345 t ORIGIN 1 aggagctgat agattccaga gagattggtg caagccgtct cagcagagtg gagtcgctgg 61 ctcccgaagt gaaacagaac acaactgcca gtgggtgtga gctcatgcac acggagatgc 121 aggccctgcg tgccgactgg aagcagtggg aagacagtgt attccaaacg cagagctgtt 181 tggagaacct ggtcagccag atggcccttt cggagcagga attctcaggc caagtggctc 241 aactggagca ggccctggaa cagttcagtg cccttctgaa aacctgggct cagcagttaa 301 ccctcctgga aggcaagaac acggatgagg agatagtgga atgctggcac aaaggacaag 361 agatactgga tgctttgcaa aaagcagagc ctagaacaga ggatctcaag tctcagctga 421 atgaactttg tcgattttcc agagacctga gtacctacag tggaaaagtt tctggcttga 481 ttaaagagta taattgtctt tgtttgcaag catccaaggg ctgccagaat aaagaacaga 541 ttttacagca aagatttcga aaggccttca gggatttcca gcagtggttg gttaatgcaa 601 aaatcactac cgccaagtgt tttgatatac ctcaaaatat aagtgaagtt tcaactagtc 661 ttcagaaaat acaggagttt ttgtcagaaa gtgaaaatgg acagcacaag ctaaacatga 721 tgctgtctaa aggggaactt ctgagtaccc tgctgaccaa agagaaagcg aaagggatcc 781 aggccaaagt tacagctgca aaagaagatt ggaaaaattt tcattcaaat ctccaccaaa 841 aagaatctgc tctagagaat ctaaagatcc aaatgaagga ctttgaagta agtgctgagc 901 ctatccagga ctggctgagt aaaactgaga agatggtcca tgaaagcagc aatcgcctct 961 atgatctgcc agcaaagagg agggagcagc agaagctcca gtctgtcctt gaggaaatac 1021 actgctacga gcctcagctc aacaggctga aagagaaagc tcagcagctg tgggaaggac 1081 aagctgccag caagagcttt aggcacagag tgtcgcagct gtcttctcag tatctagcgc 1141 taagcaattt aacaaaggag aaagtgtcaa gactggatag aatcgttgca gaacacaatc 1201 agttctctct tgggattaaa gaattacaag actggatgac ggatgcgatt cacatgctgg 1261 attcatactg ccacccgaca tccgacaaaa gtgtgctgga cagcaggacg ctcaagctcg 1321 aggtgtgcat ctttacacag aaatatctcc aacctacaga atttgttttt ctcaaaattt 1381 cccgtctcca tccacctggg gtgatgatgt cacattctct ccatgataaa tctcagatgc 1441 tttgtgagtg caacgctgtc tgccttgggt gcacatgcca gagaattcct gaatcatctg 1501 accccggatg ttttccaaaa aataaaataa aataaagccc gaaaaaaaaa aaaaaaa //