LOCUS BC039098 2400 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens desmoglein 4, mRNA (cDNA clone IMAGE:4822945), partial
cds.
ACCESSION BC039098
VERSION BC039098.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2400)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2400)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 71 Row: g Column: 18.
FEATURES Location/Qualifiers
source 1..2400
/db_xref="H-InvDB:HIT000095507"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4822945"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..2400
/gene="DSG4"
/gene_synonym="CDGF13"
/gene_synonym="CDHF13"
/gene_synonym="LAH"
/db_xref="GeneID:147409"
/db_xref="MIM:607892"
CDS <1..1074
/gene="DSG4"
/gene_synonym="CDGF13"
/gene_synonym="CDHF13"
/gene_synonym="LAH"
/codon_start=1
/product="DSG4 protein"
/protein_id="AAH39098.1"
/db_xref="GeneID:147409"
/db_xref="MIM:607892"
/translation="GTADGGGSVLGRCALQATPALLNQHPPFSEIYTNTYAAGGTVEG
GVSGVELNTGMGTAVGLMAAGAAGASGAARKRSSTMGTLRDYADADINMAFLDSYFSE
KAYAYADEDEGRPANDCLLIYDHEGVGSPVGSIGCCSWIVDDLDESCMETLDPKFRTL
AEICLNTEIEPFPSHQACIPISTDLPLLGPNYFVNESSGLTPSEVEFQEEMAASEPVV
HGDIIVTETYGNADPCVQPTTIIFDPQLAPNVVVTEAVMAPVYDIQGNICVPAELADY
NNVIYAERVLASPGVPDMSNSSTTEGCMGPVMSGNILVGPEIQVMQMMSPDLPIGQTV
GSTSPMTSRHRVTRYSNIHYTQQ"
BASE COUNT 766 a 453 c 486 g 695 t
ORIGIN
1 ggcaccgcag acggcggcgg cagcgtttta ggcagatgcg cgctgcaggc aactccagcg
61 ctgttaaacc aacatcctcc cttttcagaa atctacacca acacctatgc agccgggggc
121 acggtggaag gaggtgtatc gggagtggag ctcaacacag gtatggggac agccgttggc
181 ctcatggccg caggggccgc aggagcctca ggggccgcaa ggaagaggag ctctaccatg
241 ggaaccctgc gggactacgc tgacgcagac atcaacatgg ctttcttgga cagctacttc
301 tcggagaaag cgtatgctta tgcagatgaa gatgaaggtc gaccagccaa tgactgcttg
361 ctcatttatg accacgaggg agtcgggtct cccgtaggct ctattggttg ttgcagttgg
421 attgtggatg acttagatga aagctgcatg gaaactttag atccaaaatt taggactctt
481 gctgagatct gcttaaacac agaaattgaa ccatttcctt cacaccaggc ttgtatacca
541 atcagtactg acctcccttt gctcggacct aattactttg ttaatgaatc ttcaggattg
601 actccctcag aagttgaatt ccaagaagaa atggcagcat ctgaacccgt ggtccatggg
661 gatattattg tgactgagac ttacggtaat gctgatccat gtgtgcaacc cactacaatt
721 atttttgatc ctcagcttgc acccaatgtt gtagtaaccg aagcagtaat ggcacctgtc
781 tatgatattc aagggaatat ttgtgtacct gctgagttag cagattacaa caatgtaatc
841 tatgctgaga gagtactggc tagtcctggt gtgcctgaca tgagcaatag tagcacgact
901 gagggttgta tgggacctgt gatgagcggc aatattttag tagggccaga aattcaagtg
961 atgcaaatga tgagtccaga ccttcccata ggccaaaccg ttggctccac atccccaatg
1021 acatctcgac acagagtaac acgatacagt aacatacatt acacccaaca gtaagtgctt
1081 tatggtcagt attctatgtg gagatcttgc accttgtaat catcaataca tccaccaaaa
1141 atatataatg taccatatat attaatagtc aacaaatact cagatattct aaggtcaatg
1201 ccattatttg attataccat tttgagggtg aatatggcta ggcactttag ataagccttt
1261 ttaaaattct ttctgatttt aaataatgcg tcaaaaaatg tgcagaaaat gtattgcatc
1321 ccttgatact gtctaacgaa tagcacataa ctcgtattgt gaatcctatg ggtcttgagg
1381 cctgtagaac caatcttgta aaccaagatg ccttgttctt ggaagttaca aaagaagccc
1441 tgtctacatc caccagccat atttttcgtt agggaaatat ttatattaaa atttttaatt
1501 gaaaagttga atgaaatgta cattctgaaa ggaaattgaa aaggaacgta gagtatctgt
1561 caatatcttt agatatctga agtcatttgt ctcttcaaaa gatttttcaa tattatgcgc
1621 tattaagcaa taggagatgc ttaatataat aagaaaagag tttgccaact gaaagcatgg
1681 ctggaaatgg ttcatcaaag aaaaatatat atttttattg aactttattg atttatatga
1741 ttaactgtaa attaatctag aatagcaaaa aaaaatgaca atcctaaagt agaaagagtt
1801 attggggaaa tattagagtt ttccccactt acagggaatt ttttccctac tgttgccaat
1861 tatgtcagaa aaatacatga aatatggctt aaccaatttc attgacctga atcgtagagc
1921 tttcaattgg caaccagata ttctccaaaa gcactctgta gttattcata tattctacaa
1981 tatttactta gaagcaacta ggtgttgggt gctagtcttg gctctgtgaa tatacaggta
2041 aagaagacag acatggtttc tgccttcata gagcttctat tcatttctag acttaaaata
2101 aaactctggg atatggcttt aagttcctaa caacaataat taaccaacta cttaagtcca
2161 ttaccaagtt gtgtttctct ttgcaacact actgtttatg ttgaataaat aaaatggaaa
2221 cacattgctt acttttcgta ggcataaagc tgacttgaga aaaagaaact ctagccaggt
2281 aattttactt aattctgtaa aatatgtata cagtagcagc aataatgtga ctgagataat
2341 gtaaatgaaa taaacttatt ttcaaggctt aatccttttg aaaggaaaaa aaaaaaaaaa
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