LOCUS BC039068 3006 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens C-type lectin domain family 18, member C, mRNA (cDNA
clone MGC:34761 IMAGE:5188643), complete cds.
ACCESSION BC039068
VERSION BC039068.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3006)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3006)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: h Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58866694.
FEATURES Location/Qualifiers
source 1..3006
/db_xref="H-InvDB:HIT000052130"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34761 IMAGE:5188643"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3006
/gene="CLEC18C"
/gene_synonym="MRCL"
/gene_synonym="MRCL3"
/db_xref="GeneID:283971"
/db_xref="HGNC:HGNC:28538"
CDS 369..1274
/gene="CLEC18C"
/gene_synonym="MRCL"
/gene_synonym="MRCL3"
/codon_start=1
/product="CLEC18C protein"
/protein_id="AAH39068.1"
/db_xref="GeneID:283971"
/db_xref="HGNC:HGNC:28538"
/translation="MAGALNRKESFLLLSLHNRLRSWVQPPAADRRRLDWSDSLAQLA
QARAALCGIPTPSLASGLWRTLQVGWNMQLLPAGLASFVEVVSLWFAEGQRYSHAAGE
CARNATCTHYTQLVWATSSQLGCGRHLCSAGQAAIEAFVCAYSPRGNWEVNGKTIVPY
KKGAWCSLCTASVSGCFKAWDHAGGLCEVPRNPCRMSCQNHGRLNISTCHCHCPPGYT
GRYCQVRCSLQCVHGRFREEECSCVCDIGYGGAQCATKVHFPFHTCDLRIDGDCFMVS
SEADTYYRARMKCQVTVTPSFLGTP"
BASE COUNT 720 a 847 c 912 g 527 t
ORIGIN
1 tctgcctgct gtcgggggcg ggctggccag gccgaggccg gagcaggcag gcatcccccg
61 gagttgtctc ttttcatgcc agcgtcaaca ggaggctgtc tggacacact gattactcac
121 tcaccagcct ccctcttttg tccaccagcc cagcctgact cctggagatt gtgaatagct
181 ccatccagcc tgagaaacaa gccgggtggc tgagccaggc tgtgcacgga gtgcctgacg
241 ggcccaacag acccatgctg catccagaga cctcccctgg ccgggggcat ctcctggctg
301 tgctcctggc cctccttggc accgcctggg cagaggtgtg gccaccccag ctgcaggagc
361 aggctccgat ggccggagcc ctgaacagga aggagagttt cttgctcctc tccctgcaca
421 accgcctgcg cagctgggtc cagccccctg cggctgacag gcggaggctg gactggagtg
481 acagcctggc ccaactggct caagccaggg cagccctctg tggaatccca accccgagcc
541 tggcgtccgg cctgtggcgc accctgcaag tgggctggaa catgcagctg ctgcccgcgg
601 gcttggcgtc ctttgttgaa gtggtcagcc tatggtttgc agaggggcag cggtacagcc
661 acgcggcagg agagtgtgct cgcaacgcca cctgcaccca ctacacgcag ctcgtgtggg
721 ccacctcaag ccagctgggc tgtgggcggc acctgtgctc tgcaggccag gcagcgatag
781 aagcctttgt ctgtgcctac tcccccagag gcaactggga ggtcaacggg aagacaatcg
841 tcccctataa gaagggtgcc tggtgttcgc tctgcacagc cagtgtctca ggctgcttca
901 aagcctggga ccatgcaggg gggctctgtg aggtccccag gaatccttgt cgcatgagct
961 gccagaacca tggacgtctc aacatcagca cctgccactg ccactgtccc cctggctaca
1021 cgggcagata ctgccaagtg aggtgcagcc tgcagtgtgt gcacggccgg ttccgggagg
1081 aggagtgctc gtgcgtctgt gacatcggct acgggggagc ccagtgtgcc accaaggtgc
1141 attttccctt ccacacctgt gacctgagga tcgacggaga ctgcttcatg gtgtcttcag
1201 aggcagacac ctattacaga gccaggatga aatgtcaggt gacagtcacc cctagcttcc
1261 taggaacccc ctagggcctc aagtgagggt cttaatgcag ggaccctgga gtgagaggtg
1321 gttccttcca cgtctctgac ctcaccctat tcatcagcat aaagcagggg tcgtggactc
1381 caaggctcat agaagccagg aggtcactta ttgacctgag gggccaaggt caagaccaac
1441 ctccatctaa gggagttcca gccactggtt gccttgcagg aatgcaaggt cagggtggcc
1501 agagctcggg gttgttcaag aaaaccagca acccagactt ccactggcaa ctctcgaaac
1561 cacaattaat tactggggtt ggcaatcaac ttggatatat ttaagacact gtgcaggtga
1621 aacagaacct cctcaggggc cagaccttgc ctgggcttgt gggctgctgg tcgcgccccc
1681 gtgcacaggg agaagagaag cagacgggag cagaagggac ccctgctctt ggaagggagg
1741 ctgtgcgggc tgggggtgat gatagcccgg ccagcacaca cacgtggcat cttaggccat
1801 gggcaggggt ggcaggaagg ggcagcctgg gctctgggag ccttgcctgt gtgacccagg
1861 gtggggttac agaggaaagg cggggtgctg gcccagatca agagccagaa agtgcaggac
1921 atcctcgcct tctatctggg ccgcctggag accaccaacg aggtgattga cagtgacttc
1981 gagaccagga acttctggat cggtgagtgc ccagctgatt gggggtatgg cgagtaaggg
2041 gttgtgatgc cccaccctgc tgcaggaacc ctgggccatg gcggctgcca gcagatggca
2101 agggtgtgtt gagggcctgg agcccagagc ggggccagct gctcaccccc tttcccggga
2161 agggcccagg tagggagcac atgggggctg ccagcgctgg gaagaggggc cagaaaggca
2221 gctggcagca gactccaggg tctgagtggg ccaaccttga ctaccccggc ccagggctca
2281 cctacaagac cgccaaggac tccttccgct gggccacagg ggagcaccag gccttcacca
2341 gttttgcctt tgggcagcct gacaaccacg ggtttggcaa ctgcgtggag ctgcaggctt
2401 cagctgcctt caactggaac aaccagcgct gcaaaacccg aaaccgttac atctgccagt
2461 ttgcccagga gcacatctcc cggtggggcc cagggtcctg aggcctgacc acatggctcc
2521 ctcgcctgcc ctgggagcac cggctctgct tacctgtccg cccacctgtc tggaacaagg
2581 gccaggttaa gaccacatgc ctcatgtcca aagaggtctc agaccttgca caatgccaga
2641 agttgggcag agagaggcag ggaggccagt gagggccagg gagtgagtgt tagaagaagc
2701 tggggccctt cgcctgcttt tgattgggaa gatgggcttc aattagatgg caaaggagag
2761 gacaccgcca gtggtccaaa aaggctgctc tcttccacct ggcccagacc ctgtggggca
2821 gcggagcttc cctgtggcat gaaccccaca gggtattaaa ttatgaatca gctgaaaaaa
2881 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2941 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3001 aaaaaa
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