LOCUS BC039035 1585 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens CD3d molecule, delta (CD3-TCR complex), mRNA (cDNA
clone MGC:47775 IMAGE:5745355), complete cds.
ACCESSION BC039035
VERSION BC039035.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1585)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1585)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: j Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55775475.
FEATURES Location/Qualifiers
source 1..1585
/db_xref="H-InvDB:HIT000095474"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47775 IMAGE:5745355"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1585
/gene="CD3D"
/gene_synonym="CD3-DELTA"
/db_xref="GeneID:915"
/db_xref="HGNC:HGNC:1673"
/db_xref="MIM:186790"
CDS 2..517
/gene="CD3D"
/gene_synonym="CD3-DELTA"
/codon_start=1
/product="CD3d molecule, delta (CD3-TCR complex)"
/protein_id="AAH39035.1"
/db_xref="GeneID:915"
/db_xref="HGNC:HGNC:1673"
/db_xref="MIM:186790"
/translation="MEHSTFLSGLVLATLLSQVSPFKIPIEELEDRVFVNCNTSITWV
EGTVGTLLSDITRLDLGKRILDPRGIYRCNGTDIYKDKESTVQVHYRMCQSCVELDPA
TVAGIIVTDVIATLLLALGVFCFAGHETGRLSGAADTQALLRNDQVYQPLRDRDDAQY
SHLGGNWARNK"
BASE COUNT 448 a 324 c 322 g 491 t
ORIGIN
1 gatggaacat agcacgtttc tctctggcct ggtactggct acccttctct cgcaagtgag
61 ccccttcaag atacctatag aggaacttga ggacagagtg tttgtgaatt gcaataccag
121 catcacatgg gtagagggaa cggtgggaac actgctctca gacattacaa gactggacct
181 gggaaaacgc atcctggacc cacgaggaat atataggtgt aatgggacag atatatacaa
241 ggacaaagaa tctaccgtgc aagttcatta tcgaatgtgc cagagctgtg tggagctgga
301 tccagccacc gtggctggca tcattgtcac tgatgtcatt gccactctgc tccttgcttt
361 gggagtcttc tgctttgctg gacatgagac tggaaggctg tctggggctg ccgacacaca
421 agctctgttg aggaatgacc aggtctatca gcccctccga gatcgagatg atgctcagta
481 cagccacctt ggaggaaact gggctcggaa caagtgaacc tgagactggt ggcttctaga
541 agcagccatt accaactgta ccttcccttc ttgctcagcc aataaatata tcctctttca
601 ctcagcaggt gcctgggctt cttaaggctc ctgggcaagg cgtgggagtt gtcctgactt
661 gcttgggatc tcgccctcct acctacctgt ttcttccttc atctcctccc acctcagctt
721 ctcaagtagc tctggcacta cagacatgtg ccactatgcc tgaatatttt tatttttgtg
781 tagacacggg atctcactat gttgcctagg ctggtcttgg actcctgtac tgaagcgatc
841 ctcccacctt gacctcccaa agtgctggga ctataggtgt gagccactgt accaggctat
901 atatggtatt aaaatttttt aaatttccaa ttgtttatta ctagtatata aaaatacaat
961 taatttttga atattaatca aaacaaaaag caaaactgct acactcactt attaattcta
1021 gtaacttttt gtaagaccgt tgagtattct acatagacaa tcatgttgtc tgtgaacaaa
1081 aacagtttgt tttctttcct atctgggtgc tttttgtttc tgtttcttgg cttattgcac
1141 tggctagaac ctccagtaca atgttgaata gaagtggaga gaggacatcc ttgtcttgtt
1201 catgatctta ggaggaaagc attgtctttc atctttaagt acattagctg tgggtttttc
1261 ttagatgtcc tttaacagat tgagctagtt cttttctttc tagtttgctg agaattttta
1321 tcaaaaatag atgttgggtc tcgtcaagtg cttaccctgc atccattgag atgataatat
1381 ggttttactt ttttagtctg ttaatatggt acattacatt gatggcacga tatgttaaac
1441 caacctttca ttcctgaaaa aaactctagt catttggtat tattcttttg atatgttatt
1501 agattaaatt tattaaaatt ttgttaagaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 aaaaaaaaaa aaaaaaaaaa aaaaa
//