LOCUS BC039011 1769 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens C-type lectin domain family 10, member A, mRNA (cDNA
clone MGC:47699 IMAGE:5751735), complete cds.
ACCESSION BC039011
VERSION BC039011.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1769)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1769)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: j Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 53832017.
FEATURES Location/Qualifiers
source 1..1769
/db_xref="H-InvDB:HIT000052115"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47699 IMAGE:5751735"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1769
/gene="CLEC10A"
/gene_synonym="CD301"
/gene_synonym="HML"
/gene_synonym="HML2"
/db_xref="GeneID:10462"
/db_xref="HGNC:HGNC:16916"
/db_xref="MIM:605999"
CDS 252..1202
/gene="CLEC10A"
/gene_synonym="CD301"
/gene_synonym="HML"
/gene_synonym="HML2"
/codon_start=1
/product="C-type lectin domain family 10, member A"
/protein_id="AAH39011.1"
/db_xref="GeneID:10462"
/db_xref="HGNC:HGNC:16916"
/db_xref="MIM:605999"
/translation="MTRTYENFQYLENKVKVQGFKNGPLPLQSLLQRLCSGPCHLLLS
LGLGLLLLVIICVVGFQNSKFQRDLVTLRTDFSNFTSNTVAEIQALTSQGSSLEETIA
SLKAEVEGFKQERQAGVSELQEHTTQKAHLGHCPHCPSVCVPVHSEMLLRVQQLVQDL
KKLTCQVATLNNNASTEGTCCPVNWVEHQDSCYWFSHSGMSWAEAEKYCQLKNAHLVV
INSREEQNFVQKYLGSAYTWMGLSDPEGAWKWVDGTDYATGFQNWKPGQPDDWQGHGL
GGGEDCAHFHPDGRWNDDVCQRPYHWVCEAGLGQTSQESH"
BASE COUNT 470 a 476 c 427 g 396 t
ORIGIN
1 ggagatggga tgtcccagat gatagggctc ctgggatttc agacccaaga ccagcaggac
61 tccagtcacc tctaccccag ctctccagga cacagcgctc ccaactctga gtgacgtccc
121 acctctggtc cttgcagcac aaccaacgtg ggaatcacac cctccagacc tcccacagct
181 ccaccccaga ctgggcgccg gccctgcctc catttcagct gtgacaacct cagagccgtg
241 ttggcccaag catgacaagg acgtatgaaa acttccagta cttggagaat aaggtgaaag
301 tccaggggtt taaaaatggg ccacttcctc tccagtccct cctgcagcgt ctctgctctg
361 ggccctgcca tctcctgctg tccctgggcc tcggcctcct gctgctggtc atcatctgtg
421 tggttggatt ccaaaattcc aaatttcaga gggacctggt gaccctgaga acagatttta
481 gcaacttcac ctcaaacact gtggcggaga tccaggcact gacttcccag ggcagcagct
541 tggaagaaac gatagcatct ctgaaagctg aggtggaggg tttcaagcag gaacggcagg
601 caggggtatc tgagctccag gaacacacta cgcagaaggc acacctaggc cactgtcccc
661 actgcccatc tgtgtgtgtc ccagttcatt ctgaaatgct cctgcgagtc cagcagctgg
721 tgcaagacct gaagaaactg acctgccagg tggctactct caacaacaat gcctccactg
781 aagggacctg ctgccctgtc aactgggtgg agcaccaaga cagctgctac tggttctctc
841 actctgggat gtcctgggcc gaggctgaga agtactgcca gctgaagaac gcccacctgg
901 tggtcatcaa ctccagggag gagcagaatt ttgtccagaa atatctgggc tccgcataca
961 cctggatggg cctcagtgac cctgaaggag cctggaagtg ggtggatgga acagactatg
1021 cgaccggctt ccagaactgg aagccaggcc agccagacga ctggcagggg cacgggctgg
1081 gtggaggcga ggactgtgct cacttccatc cagacggcag gtggaatgac gacgtctgcc
1141 agaggcccta ccactgggtc tgcgaggctg gcctgggtca gaccagccag gagagtcact
1201 gagctgcctt tggtgggacc acccggccac agaaatggcg gtgggaggag gactcttctc
1261 acgacctcct cgcaagaccg ctctgggaga gaaataagca ctgggagatt ggaagcactg
1321 ctaacatttt gaattttttt ctctttaatt ttaaaaagat ggtatagtgt tcttaagctt
1381 ttattttttt tccaactttt gaaagtcaac ttcatgaagg tataattttt acataataaa
1441 aatgcactca tttaaagagt agagatgact ttgacaaata tgcatgccta ggtgactacc
1501 actccgatca caatagataa cattgccatc gcccccacca gtcccctcat gcctctgggc
1561 agtccaacca cttccctgtt tccaggccag tgatctactt ctttttcact atttattggc
1621 cttgcctctt ctagagcttc tagaacttca tataagtgaa atcatacact ctcgtgtata
1681 tacttcatat aagtgaatat atactctcgt gagaacttaa aaaaaaaaaa aaaaaaaaaa
1741 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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