LOCUS BC039005 1790 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens H2A histone family, member Z, mRNA (cDNA clone
IMAGE:5229701), with apparent retained intron.
ACCESSION BC039005
VERSION BC039005.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1790)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1790)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: f Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 53759146
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1790
/db_xref="H-InvDB:HIT000095455"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5229701"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 487 a 324 c 431 g 548 t
ORIGIN
1 cggtgcgacg aaggagtagg tggtgggatc tcaccgtggg tccgattagc cttttctctg
61 ccttgcttgc ttgagcttca gcggaattcg aaatggctgg cggtaaggct ggaaaggact
121 ccggaaaggc caagacaaag gcggtttccc gctcgcagag agccggcttg caggtcagta
181 gttgttcgtg cagtctggga gtcatgatgt ttttctttgc atttcctttt ttgttattca
241 tcgctctcga tgggcgtttt gtgtatgcgt gggtgatgcg gtgtcgcgac ttgggctgcc
301 catacgataa atatgggggg gaggaatcac gtgtttcgat gtcgggacgc gttgctgcgc
361 ccgtgcccct tgctttggcg cgcatataat ttccccatct ctagttctca tttttgtgca
421 tttatgtttg tgtatgctta aaatttaagt tcccagtggg ccgtattcat cgacacctaa
481 aatctaggac gaccagtcat ggacgtgtgg gcgcgactgc cgctgtgtac agcgcagcca
541 tcctggagta cctcaccgca gaggtaaatg ggtgaacgcc tataatccgg agaaggtttg
601 gggggcgggg aggcggcaag agggaaggag gaaagtgatg caagaaaact cccaggccct
661 gaacgcggcg agaggcctaa gagaacgcta gagggagctg gtgttcaaca aggatcctac
721 tgagcttgag ttctctgctc ttggaattaa aattgcgtgc cccctgtata tcttgccagt
781 cagatagtga ggaacgattc cagttggtag atctgcgttt gtgagggttt tattctgttc
841 tctgaatctt ggccaaagga aagttggaag gcaactgaca gattctgcct tttaggtact
901 tgaactggca ggaaatgcat caaaagactt aaaggtaaag cgtattaccc ctcgtcactt
961 gcaacttgct attcgtggag atgaagaatt ggattctctc atcaaggcta caattgctgg
1021 tggtggtatg ttaacttcta acattttaaa aaatttcttc agaggaagga attttttgct
1081 gcttttaatt agtttttcca ggagaggaaa tttaagtata ttttcaatga tggaagtatg
1141 gttgtatcat gaaatttgat ttatatgtat aactcaatga atttttactt catacttgag
1201 ctgcatgttt ttaaagatac ctttcaagtt gaacagtata cactttcttg gtttcaaata
1261 ctgtgatttt ttaaaaaatc ttaagtagaa ttaattcctg tcactctcct aggtgtcatt
1321 ccacacatcc acaaatctct gattgggaag aaaggacaac agaagactgt ctaaaggatg
1381 cctggattcc ttgttatctc aggactctaa atactctaac agctgtccag tgttggtgat
1441 tccagtggac tgtatctctg tgaaaaacac aattttgcct ttttgtaatt ctatttgagc
1501 aagttggaag tttaattagc tttccaacca accaaatttc tgcattcgag tcttaaccat
1561 atttaagtgt tactgtggct tcaaagaagc tattgattct gaagtagtgg gttttgattg
1621 agttgactgt ttttaaaaaa ctgtttggat tttaattgtg atgcagaagt tatagtaaca
1681 aacatttggt tttgtacaga cattatttcc actctggtgg ataagttcaa taaaggtcat
1741 atcccaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//