LOCUS BC039002 2610 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens interferon regulatory factor 2 binding protein 1, mRNA
(cDNA clone MGC:47879 IMAGE:5182566), complete cds.
ACCESSION BC039002
VERSION BC039002.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2610)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2610)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: d Column: 17.
FEATURES Location/Qualifiers
source 1..2610
/db_xref="H-InvDB:HIT000052111"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47879 IMAGE:5182566"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2610
/gene="IRF2BP1"
/gene_synonym="DKFZP434M154"
/db_xref="GeneID:26145"
/db_xref="HGNC:HGNC:21728"
CDS 362..2116
/gene="IRF2BP1"
/gene_synonym="DKFZP434M154"
/codon_start=1
/product="interferon regulatory factor 2 binding protein
1"
/protein_id="AAH39002.1"
/db_xref="GeneID:26145"
/db_xref="HGNC:HGNC:21728"
/translation="MASVQASRRQWCYLCDLPKMPWAMVWDFSEAVCRGCVNFEGADR
IELLIDAARQLKRSHVLPEGRSPGPPALKHPATKDLAAAAAQGPQLPPPQAQPQPSGT
GGGVSGQDRYDRATSSGRLPLPSPALEYTLGSRLANGLGREEAVAEGARRALLGSMPG
LMPPGLLAAAVSGLGSRGLTLAPGLSPARPLFGSDFEKEKQQRNADCLAELNEAMRGR
AEEWHGRPKAVREQLLALSACAPFNVRFKKDHGLVGRVFAFDATARPPGYEFELKLFT
EYPCGSGNVYAGVLAVARQMFHDALREPGKALASSGFKYLEYERRHGSGEWRQLGELL
TDGVRSFREPAPAEALPQQYPEPAPAALCGPPPRAPSRNLAPTPRRRKASPEPEGEAA
GKMTTEEQQQRHWVAPGGPYSAETPGVPSPIAALKNVAEALGHSPKDPGGGGGPVRAG
GASPAASSTAQPPTQHRLVARNGEAEVSPTAGAEAVSGGGSGTGATPGAPLCCTLCRE
RLEDTHFVQCPSVPGHKFCFPCSREFIKAQGPAGEVYCPSGDKCPLVGSSVPWAFMQG
EIATILAGDIKVKKERDP"
BASE COUNT 471 a 865 c 867 g 407 t
ORIGIN
1 gaaggaggtg gaggcggcgg cggccgttgc agcggcggcg gcgagagcgg cgggagcccg
61 aggcggcagc gctcgcggcc catcgtgggg cccgagctgt gcgcctcggc tcggagcccg
121 gaccgggcgg gggcgccgac gtgcctcagc ctgccttcgc gagggaggcg ggagtgagca
181 gaaaggctta gggcccaggg ggcggggaag gggggccggg cctggatccg gcggggaggc
241 cgagccggag gccggaccgt ggctcgcgct gtccccggga cgcggatcga acgttggcgg
301 cgcggatcgt acgtcggcgg ccggtggaac gcgggagctg ggcggcgcgc ggactggggc
361 catggcgtct gtgcaggcgt cccgccgcca gtggtgctac ctgtgcgacc tgcccaagat
421 gccgtgggcc atggtgtggg acttcagcga ggccgtgtgt cgcggctgcg tgaacttcga
481 gggcgcggac cgcatcgaac tgctcatcga tgccgcccgc cagctcaagc gcagccacgt
541 gctccccgag ggccgctcgc ccgggccccc ggcccttaag cacccggcca ccaaggacct
601 ggcggcggca gccgcacagg ggccccagct gccgcccccg caggcccagc cccagccgtc
661 agggaccggc ggcggcgtgt cgggccagga ccgctatgac agggccacat catcaggccg
721 cctccccctg ccctcgcccg ccctggagta cactctgggg tcccgcctgg ccaatgggct
781 gggccgtgag gaggccgtgg ctgagggggc gcgaagggcc ttgcttggct ccatgcctgg
841 cttgatgccc cctgggctgc tggcagctgc agtgtctggc ctgggaagcc gaggcctgac
901 gctggcaccc ggcttgagtc ctgcccgtcc cctcttcggc tccgatttcg agaaagagaa
961 gcagcagagg aatgcggact gtctggcaga actgaacgag gccatgcgag gccgggcaga
1021 ggaatggcac gggcgcccca aagcagtgcg ggaacagcta ctggcgctgt ccgcctgcgc
1081 cccgttcaat gtgcgcttca agaaggatca cgggctggtg gggcgagtgt tcgccttcga
1141 tgctactgcc cgtcctccag gatacgagtt cgagctgaag ctcttcaccg aatacccctg
1201 tggttccggc aatgtgtacg ccggcgtcct ggcagtggct cgccagatgt tccacgatgc
1261 tctgcgggag ccgggcaagg cactggcttc ttcgggcttc aagtacctcg aatatgaacg
1321 ccggcatgga tcaggagaat ggcggcagct gggcgagctg cttaccgacg gcgtccgcag
1381 cttccgcgag ccagctcccg cggaggccct gccccagcag tacccagagc cggcccctgc
1441 ggctctctgt ggcccacccc cgcgagcccc atcccggaac ctggcgccca cgccgcgccg
1501 tcgcaaggca tcccccgagc cggagggcga ggcggctggg aagatgacca ccgaggagca
1561 gcagcaacgg cactgggtgg cacccggcgg cccgtactcc gctgagaccc ctggtgtgcc
1621 ctcgcccatt gccgccctga agaatgtggc cgaagccctg ggccactcac ccaaggaccc
1681 tggcggaggc ggggggcctg tgcgtgcagg gggcgccagc cctgcagcct cctccacggc
1741 ccagccgcca acccagcatc gccttgtggc ccgcaacggc gaagcagaag tcagtcccac
1801 agcgggggcc gaagctgtca gcgggggtgg cagcggcact ggggcgaccc ctggggcccc
1861 cctgtgctgt accctgtgca gggagcggct agaagacacc cacttcgtcc agtgcccctc
1921 ggtgcccgga cacaagttct gctttccctg ctcccgggag ttcatcaagg cgcagggccc
1981 ggccggggag gtgtactgcc cgagcggaga caagtgcccg ctggtcggct cctccgtgcc
2041 ctgggccttc atgcagggcg agatcgccac catccttgct ggagacatca aagttaagaa
2101 agaacgggac ccctaggcta ccactgcctc caggctactg ccctctgccc ctttgccacc
2161 caccgctgcc gcggataaat tattccctcc ccgacccagc ccagtgccac ctctatctgt
2221 gtacatactc ccttcttcca cccagatggg tcccctgggg tagatgcatt gtgggtgggg
2281 ggagaaagct tgtggctcct gtccgagggg gtgtttgggg tcccttggcc cctccagttt
2341 ccctctgtcc tccttggctt ggctttgctg ctgcttgtag ttgggggaga ggtgcccccc
2401 tcctccttga gaagggacct cctgaaaact cgctctttat aaacgaggca aaagcattta
2461 attcccaccc ccccaccccc cgctcccttc tgctccttca ataaaccgaa agatgggttt
2521 tttttttcaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2581 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//