LOCUS BC038997 1049 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens family with sequence similarity 162, member B, mRNA
(cDNA clone IMAGE:6059932), partial cds.
ACCESSION BC038997
VERSION BC038997.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1049)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1049)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: o Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1049
/db_xref="H-InvDB:HIT000095450"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6059932"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1049
/gene="FAM162B"
/gene_synonym="bA86F4.2"
/db_xref="GeneID:221303"
/db_xref="HGNC:HGNC:21549"
CDS <1..635
/gene="FAM162B"
/gene_synonym="bA86F4.2"
/codon_start=3
/product="FAM162B protein"
/protein_id="AAH38997.1"
/db_xref="GeneID:221303"
/db_xref="HGNC:HGNC:21549"
/translation="TRPERQGFQLHVPGSPARGRPGRDEESCGDNACGWVRRCGCGAG
QAGSMLRAVGSLLRLGRGLTVRCGPGAPLEATRRPAPALPPRGLPCYSSGGAPSNSGP
QGHGEIHRVPTQRRPSQFDKKILLWTGRFKSMEEIPPRIPPEMIDTARNKARVKACYI
MIGLTIIACFAVIVSAKRAVERHESLTSWNLAKKAKWREEAALAAQAKAK"
BASE COUNT 276 a 264 c 267 g 242 t
ORIGIN
1 ccacgcgtcc ggagcgccag gggttccagc tgcacgtccc aggctctcca gcgcgcggca
61 ggccggggcg ggacgaggag agctgcgggg acaacgcctg tggctgggtc cggaggtgcg
121 ggtgcggcgc gggacaagcg ggcagcatgc tcagggcggt cgggagccta ctgcgccttg
181 gccgcgggct aacagtccgc tgcggccccg gggcgcctct cgaggccacg cgacggcccg
241 caccggctct tccgccccgg ggtctcccct gctactccag cggcggggcc cccagcaatt
301 ctgggcccca aggtcacggg gagattcacc gagtccccac gcagcgcagg ccttcgcagt
361 tcgacaagaa aatcctgctg tggacagggc gtttcaaatc gatggaggag atcccgcctc
421 ggatcccgcc agaaatgata gacaccgcaa gaaacaaagc tcgagtgaaa gcttgttaca
481 taatgattgg actcacaatt atcgcctgct ttgctgtgat agtgtcagcc aaaagggctg
541 tagaacgaca tgaatcctta acaagttgga acttggcaaa gaaagctaag tggcgtgaag
601 aagctgcatt ggctgcacag gctaaagcta aatgatattc taagtgacaa agtgttcacc
661 tgaataccat ccctgtcatc agcaacagta gaagatggga aaaatagaat atttaccaaa
721 atatctgcca tggttttatt ttggtaacaa gaagcacaat gtctttttta tttttatttt
781 ttagtaaact tttactgaag tataccatgc attcaaaaag tggacaaaac tgtatacagt
841 ctgatagata tttatgtcgt gaacacctgt gtaaccactg ccaaagtgaa gatgtagaat
901 attggcaaca cttcacagcc tcattcctgc cttttctcag ccattacctc ccaaacatag
961 cagtttttct gagtttcatc acctttgatt cattttgcct gtttttgaac tttatataaa
1021 tggatttata cattaaaaaa aaaaaaaaa
//