LOCUS BC038992 2802 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CD3e molecule, epsilon associated protein, mRNA (cDNA
clone MGC:47680 IMAGE:6052122), complete cds.
ACCESSION BC038992
VERSION BC038992.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2802)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2802)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: o Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6912245.
FEATURES Location/Qualifiers
source 1..2802
/db_xref="H-InvDB:HIT000095446"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47680 IMAGE:6052122"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2802
/gene="CD3EAP"
/gene_synonym="ASE-1"
/gene_synonym="CAST"
/gene_synonym="PAF49"
/db_xref="GeneID:10849"
/db_xref="HGNC:HGNC:24219"
/db_xref="MIM:107325"
CDS 17..1549
/gene="CD3EAP"
/gene_synonym="ASE-1"
/gene_synonym="CAST"
/gene_synonym="PAF49"
/codon_start=1
/product="CD3e molecule, epsilon associated protein"
/protein_id="AAH38992.1"
/db_xref="GeneID:10849"
/db_xref="HGNC:HGNC:24219"
/db_xref="MIM:107325"
/translation="MEEPQAGDAARFSCPPNFTAKPPASESPRFSLEALTGPDTELWL
IQAPADFAPECFNGRHVPLSGSQIVKGKLAGKRHRYRVLSSCPQAGEATLLAPSTEAG
GGLTCASAPQGTLRILEGPQQSLSGSPLQPIPASPPPQIPPGLRPRFCAFGGNPPVTG
PRSALAPNLLTSGKKKKEMQVTEAPVTQEAVNGHGALEVDMALGSPEMDVRKKKKKKN
QQLKEPEAAGPVGTEPTVETLEPLGVLFPSTTKKRKKPKGKETFEPEDKTVKQEQINT
EPLEDTVLSPTKKRKRQKGTEGMEPEEGVTVESQPQVKVEPLEEAIPLPPTKKRKKEK
GQMAMMEPGTEAMEPVEPEMKPLESPGGTMAPQQPEGAKPQAQAALAAPKKKTKKEKQ
QDATVEPETEVVGPELPDDLEPQAAPTSTKKKKKKKERGHTVTEPIQPLEPELPGEGQ
PEARATPGSTKKRKKQSQESRMPETVPQEEMPGPPLNSESGEEAPTGRDKKRKQQQQQ
PV"
BASE COUNT 708 a 755 c 772 g 567 t
ORIGIN
1 ccacgcgtcc gccaggatgg aggagcccca ggccggcgat gctgctcggt tctcttgtcc
61 ccccaacttt accgcgaagc ccccagcctc agagtcccct cgtttctcct tggaggcgct
121 gacgggtcca gatacggagc tgtggcttat tcaggcccct gcagactttg ccccagaatg
181 cttcaatggg cggcatgtgc ctctctctgg ctcccagatc gtcaagggca aattggcagg
241 caagcggcac cgctatcgag tcctcagcag ctgtccccaa gctggagaag cgaccctgct
301 ggccccctca acggaggcag gaggtggact cacctgtgcc tcagcccccc agggcaccct
361 aaggatcctt gagggtcccc agcaatccct gtcagggagc cctctgcagc ccatcccagc
421 aagtccccca ccacagatcc ctcctggcct gaggcctcgg ttctgtgcct ttgggggcaa
481 cccaccagtc acagggccta ggtcagcctt ggcccccaac ctgctcacct cagggaagaa
541 gaaaaaggag atgcaggtga cagaggcccc agtcactcag gaggcagtga atgggcacgg
601 ggccctggag gtggacatgg ctttggggtc gccagaaatg gatgtgcgga agaagaagaa
661 gaaaaaaaat cagcagctga aagaaccaga ggcagcaggg cctgtgggga cagagcccac
721 agtggagaca ctggagcctc tgggagtgct gttcccgtcc accaccaaga agaggaagaa
781 gcccaaaggg aaagaaacct tcgagccaga agacaagaca gtgaagcagg aacagattaa
841 cactgagcct ctagaagaca cagtcctgtc cccgaccaaa aagagaaaga ggcaaaaggg
901 gacggaaggg atggagccag aggagggggt gacagttgag tctcagccac aggtgaaggt
961 ggagccactg gaggaagcca tccctctgcc ccctacgaag aagaggaaaa aagaaaaggg
1021 acagatggca atgatggagc cagggacgga ggcgatggag ccagtggagc cggagatgaa
1081 gcctctggag tccccagggg ggaccatggc gcctcaacag ccagaaggag cgaagcctca
1141 ggcccaggca gctctggcag ctcccaaaaa gaagacgaag aaagaaaaac agcaagatgc
1201 cacagtggag ccagagacag aggtggtggg gcctgagctg ccggatgacc ttgagcctca
1261 ggcagctccc acatccacca agaagaagaa gaagaagaaa gagagaggtc acacagtgac
1321 tgagccaatt cagccactag agcctgaact gccaggggag ggacagcctg aagccagggc
1381 aactccggga tccaccaaga agaggaagaa gcagagtcag gaaagccgga tgccagagac
1441 agtgccccaa gaggagatgc cagggccgcc actgaattca gagtctgggg aggaggctcc
1501 cacaggccgg gacaagaagc ggaagcagca gcagcagcag cctgtgtagt ctgcccccgg
1561 gaaactgagg aactaaagaa agctgaaggt gcccacctgg gccaccagaa ggtgacaccc
1621 ccagaatccc tccccagaga ctgcaccagc gcagccagca ggagcctggc ctgggaggac
1681 gatttattat tacactgggg gtttccttgg cagctggggt catcagggta ctttcaagaa
1741 gggctcgtgc aggacatcaa acagcctccg ggcctggatg ggagggagaa aaaaatgagg
1801 aaccagtcat taaaggagct gtttcctggg taaatctaga gtggggtttt ggttctttat
1861 tttcccctat accctcaagc atttatccat tgagttacaa acaatccagt tacaatcttt
1921 ttaagttatt attattatta tttttttttt tttttttgag atggagtctc gctctgtcgc
1981 ccaggttgga gtgcagtggc gcaatctcgg ctcactgcaa gctccgcctc ccgggttcac
2041 gccattctcc tgcctcagcc tcctgagtag ctgggactac aggcccctgc ccagctaatt
2101 ttttgtattt ttttttagta gagatggggt ttcaccacgt tagccaggat ggtctcgatc
2161 tcctgacctc ctgatgcgcc tgcctcagcc tcccagtgct gggattatag gtgtgagcca
2221 ctgcgcctgg ctaagttatt attatttttt tgagacagtc tcctggtgtc acccaggctg
2281 gagtgcagtg gtgtgatctt ggctcactgc aacctccgcc tcctgggttc caacgattct
2341 cctgcctcag cctcccgagt agctgggcct aaaggtgccc accactatac ccggctaatt
2401 tttgtatttt tagtagagac aggggtttca ccatattggc caggctggtc tcgaactcct
2461 gacctcgtga tccacctgcc ttgacctccc aaagtgctag gataacaggt gtgagccacc
2521 gcaccctgcc aagttatttt aaaatgtacc attattattg actatagtca cctggttgtg
2581 ttatcaaata gtatgtctta ttcattcttt ctttgtgtgt gtgtgtgtgt gtgtgtgtgt
2641 gtgtggtacc cattaacctt ccccatctcc ctgccagccc ctaactaccc tccccagcct
2701 ccaggaacta tccatccact cttatctcca tgagttcaat tgttttgatt tttagataca
2761 caaataaata agaacatgca atgttaaaaa aaaaaaaaaa aa
//