LOCUS BC038971 1517 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens family with sequence similarity 49, member A, mRNA (cDNA clone MGC:47569 IMAGE:5200807), complete cds. ACCESSION BC038971 VERSION BC038971.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1517) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1517) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 82 Row: e Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 13540579. FEATURES Location/Qualifiers source 1..1517 /db_xref="H-InvDB:HIT000052099" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:47569 IMAGE:5200807" /tissue_type="Brain, adult, 6 pooled whole brains" /clone_lib="NIH_MGC_114" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1517 /gene="FAM49A" /gene_synonym="DKFZP566A1524" /gene_synonym="FLJ11080" /db_xref="GeneID:81553" /db_xref="HGNC:HGNC:25373" CDS 205..1176 /gene="FAM49A" /gene_synonym="DKFZP566A1524" /gene_synonym="FLJ11080" /codon_start=1 /product="family with sequence similarity 49, member A" /protein_id="AAH38971.1" /db_xref="GeneID:81553" /db_xref="HGNC:HGNC:25373" /translation="MGNLLKVLTREIENYPHFFLDFENAQPTEGEREIWNQISAVLQD SESILADLQAYKGAGPEIRDAIQNPNDIQLQEKAWNAVCPLVVRLKRFYEFSIRLEKA LQSLLESLTCPPYTPTQHLEREQALAKEFAEILHFTLRFDELKMRNPAIQNDFSYYRR TISRNRINNMHLDIENEVNNEMANRMSLFYAEATPMLKTLSNATMHFVSENKTLPIEN TTDCLSTMTSVCKVMLETPEYRSRFTSEETLMFCMRVMVGVIILYDHVHPVGAFCKTS KIDMKGCIKVLKEQAPDSVEGLLNALRFTTKHLNDESTSKQIRAMLQ" BASE COUNT 487 a 342 c 330 g 358 t ORIGIN 1 cggcggagcg ggcggcagag cagggcggcg gcgactcgca gggtaccacc atcttaagga 61 cagaaaagct acaggactct aggaggccac cgtcctgatt tgggaagtcc aacttacttt 121 ggccagacag cagctaagct ggttcatccc atcagcctgg attggtgaaa ctgaatcaca 181 ggagatattt ccaggtttgc tgggatggga aacctgctca aagtccttac cagggaaatt 241 gaaaactatc cacacttttt cctggatttt gaaaatgctc agcctacaga aggagagaga 301 gaaatctgga accagatcag cgccgtcctt caggattctg agagcatcct tgcagacctg 361 caggcttaca aaggcgcagg cccagagatc cgagatgcaa ttcaaaatcc caatgacatt 421 cagcttcaag aaaaagcttg gaatgcggtg tgccctcttg ttgtgaggct aaagagattt 481 tacgagtttt ccattagact agaaaaagct cttcagagtt tattggaatc tctgacttgt 541 ccaccctaca caccaaccca acacctggaa agggaacagg ccctggcaaa ggagtttgcc 601 gaaattttac attttaccct tcgattcgat gagctgaaga tgaggaaccc ggctattcag 661 aatgacttca gctactacag aagaacaatc agtcgcaacc gcatcaacaa catgcaccta 721 gacattgaga atgaagtcaa taatgagatg gccaatcgaa tgtccctctt ctatgcagaa 781 gccacgccaa tgctgaaaac ccttagcaat gccacaatgc actttgtctc tgaaaacaaa 841 actctgccaa tagagaacac cacagactgc ctcagcacaa tgacaagtgt ctgtaaagtc 901 atgctggaaa ctccggagta cagaagtagg tttacgagtg aagagaccct gatgttctgc 961 atgagggtga tggtgggagt catcatcctc tatgaccatg tccaccctgt gggagctttc 1021 tgcaagacat ccaagatcga tatgaaaggc tgcataaaag ttttgaagga gcaggcccca 1081 gacagtgtgg aggggctgct aaatgccctc aggttcacta caaagcactt gaacgatgaa 1141 tcaacttcca aacagattcg agcaatgctt cagtagagct ctgctcaaag aagaggatct 1201 atgtgctgac ctcagaagat gtatatgttt acataattta atacagattg atgttaatac 1261 ttgtgtattt acataaccgt ttccttcttg tcactgaaat atatggacct taatttgtat 1321 cctgactgac tcaacccagc agagcataaa ttgacttgag agccttacct ttgatgtctg 1381 aaatgaaacc cccttctcca aaggcaaaat tcggagactt tgatctttgc tactggagtc 1441 ctttaacaac acctataacg ataaaaaatt cctaattgtt aaaaaaaaaa aaaaaaaaaa 1501 aaaaaaaaaa aaaaaaa //