LOCUS BC038965 1168 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens high density lipoprotein binding protein (vigilin),
mRNA (cDNA clone IMAGE:3920936).
ACCESSION BC038965
VERSION BC038965.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1168)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1168)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: a Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..1168
/db_xref="H-InvDB:HIT000095430"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3920936"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 284 a 303 c 274 g 307 t
ORIGIN
1 cacgcgtccg gcagaatgca gaccacgccg ctggatgccg agagaccctg ctctccgagg
61 gaggcatctg tgtcatgctg tgagggctga ggacggggcc ctagtctctg gttttctggt
121 cttaacatcc ttatctgtgt ccgccacgga ggtgactgag ctgctagcga gttgtcctgt
181 cccaggtact tgagttttgg aaaagctgac tcacgcccat ccatctcaca gcccttccct
241 ggggacagtc gcttccgcct tgacacctca ctctcagttg aataactcaa gcttggtcat
301 cttcagactc gaattcttga gtagacccag acggcttagc ccaagtctag ttgcagctgc
361 ctcggcaagt ccccatttgc tcaggcagcc ctgaatgggc ctgtttacag gaatggtaaa
421 ttgggattgg aaggaatata gcttccagct tcataggcta gggtgaccac ggcttaggaa
481 acagggaaag aaagcaaggc ccttttcctg cctttcccgg gatctgtcta ctccacctcc
541 acgggggagg ccagtgggga agggctgtca cctcttcccc atctgcatga gttctggaac
601 tctgtcctgt tggctgcttg cttccagctc cccccaatct ccatcgcagc gggttcctcc
661 tgtcttttct acagtgtcat aaaacatcct gcccctaccc tctcccaaag gtcaatttta
721 attctcacca agttttgcac atctctgtat gtcgcttgat gtcttagacg cgagcccttt
781 cctaaactgt tcagcgctct cttttccttt gggtggttgt tgcaagggtg atgacatgac
841 tgtccccagg cctgtctccc tgaagcgtct gtgctgtcag gacagccctg ggcagagatg
901 aggcaggggt gaggcgtgcg tgtgcttttc ctccttgttg gatgtcttcc atatcatctg
961 tttccatagc tacaatccat cccttggcct taactttgga atttggagat tatatgcaaa
1021 catgtgtaaa ggctcatgaa tatggatgac actggaattt tataaattct aaaataaaac
1081 ccgaaaccag atgtagcatg ctgggactca ttttgaaaaa aaaaaaaaaa aaaaaaaaaa
1141 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//