LOCUS BC038961 2017 bp mRNA linear HUM 27-JUN-2007
DEFINITION Homo sapiens spinster homolog 1 (Drosophila), mRNA (cDNA clone
MGC:47562 IMAGE:6053095), complete cds.
ACCESSION BC038961
VERSION BC038961.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2017)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2017)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: o Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14042967.
FEATURES Location/Qualifiers
source 1..2017
/db_xref="H-InvDB:HIT000052096"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47562 IMAGE:6053095"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2017
/gene="SPNS1"
/gene_synonym="HSpin1"
/gene_synonym="LAT"
/gene_synonym="nrs"
/gene_synonym="PP2030"
/gene_synonym="SPIN1"
/gene_synonym="SPINL"
/db_xref="GeneID:83985"
/db_xref="HGNC:HGNC:30621"
CDS 155..1741
/gene="SPNS1"
/gene_synonym="HSpin1"
/gene_synonym="LAT"
/gene_synonym="nrs"
/gene_synonym="PP2030"
/gene_synonym="SPIN1"
/gene_synonym="SPINL"
/codon_start=1
/product="SPNS1 protein"
/protein_id="AAH38961.1"
/db_xref="GeneID:83985"
/db_xref="HGNC:HGNC:30621"
/translation="MAGSDTAPFLSQADDPDDGPVPGTPGLPGSTGNPKSEEPEVPDQ
EGLQRITGLSPGRSALIVAVLCYINLLNYMDRFTVAGVLPDIEQFFNIGDSSSGLIQT
VFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLGSSFIPGEHFWLLLLTRGLV
GVGEASYSTIAPTLIADLFVADQRSRMLSIFYFAIPVGSGLGYIAGSKVKDMAGDWHW
ALRVTPGLGVVAVLLLFLVVREPPRGAVERHSDLPPLNPTSWWADLRALARNPSFVLS
SLGFTAVAFVTGSLALWAPAFLLRSRVVLGETPPCLPGDSCSSSDSLIFGLITCLTGV
LGVGLGVEISRRLRHSNPRADPLVCATGLLGSAPFLFLSLACARGSIVATYIFIFIGE
TLLSMNWAIVADILLYVVIPTRRSTAEAFQIVLSHLLGDAGSPYLIGLISDRLRRNWP
PSFLSEFRALQFSLMLCAFVGALGGAAFLGTAIFIEADRRRAQLHVQGLLHEAGSTDD
RIVVPQRGRSTRVPVASVLI"
BASE COUNT 318 a 662 c 618 g 419 t
ORIGIN
1 ccacgcgtcc gcgcgtcaca tgaccggctt taagcaacat ggcggctgcc gtggtgcagc
61 gcccgggctg agcgacagca agtgcagcgg gctcctaccc cgggtgggat cgtcggtggg
121 accggagcgc gggcgggcgc ggccccccgg gaccatggcc gggtccgaca ccgcgccctt
181 cctcagccag gcggatgacc cggacgacgg gccagtgcct ggcaccccgg ggttgccagg
241 gtccacgggg aacccgaagt ccgaggagcc cgaggtcccg gaccaggagg ggctgcagcg
301 catcaccggc ctgtctcccg gccgttcggc tctcatagtg gcggtgctgt gctacatcaa
361 tctcctgaac tacatggacc gcttcaccgt ggctggcgtc cttcccgaca tcgagcagtt
421 cttcaacatc ggggacagta gctctgggct catccagacc gtgttcatct ccagttacat
481 ggtgttggca cctgtgtttg gctacctggg tgacaggtac aatcggaagt atctcatgtg
541 cgggggcatt gccttctggt ccctggtgac actggggtca tccttcatcc ccggagagca
601 tttctggctg ctcctcctga cccggggcct ggtgggggtc ggggaggcca gttattccac
661 catcgcgccc actctcattg ccgacctctt tgtggccgac cagcggagcc ggatgctcag
721 catcttctac tttgccattc cggtgggcag tggtctgggc tacattgcag gctccaaagt
781 gaaggatatg gctggagact ggcactgggc tctgagggtg acaccgggtc taggagtggt
841 ggccgttctg ctgctgttcc tggtagtgcg ggagccgcca aggggagccg tggagcgcca
901 ctcagatttg ccacccctga accccacctc gtggtgggca gatctgaggg ctctggcaag
961 aaatcctagt ttcgtcctgt cttccctggg cttcactgct gtggcctttg tcacgggctc
1021 cctggctctg tgggctccgg cattcctgct gcgttcccgc gtggtccttg gggagacccc
1081 accctgcctt cccggagact cctgctcttc ctctgacagt ctcatctttg gactcatcac
1141 ctgcctgacc ggagtcctgg gtgtgggcct gggtgtggag atcagccgcc ggctccgcca
1201 ctccaacccc cgggctgatc ccctggtctg tgccactggc ctcctgggct ctgcaccctt
1261 cctcttcctg tcccttgcct gcgcccgtgg tagcatcgtg gccacttata ttttcatctt
1321 cattggagag accctcctgt ccatgaactg ggccatcgtg gccgacattc tgctgtacgt
1381 ggtgatccct acccgacgct ccaccgccga ggccttccag atcgtgctgt cccacctgct
1441 gggtgatgct gggagcccct acctcattgg cctgatctct gaccgcctgc gccggaactg
1501 gcccccctcc ttcttgtccg agttccgggc tctgcagttc tcgctcatgc tctgcgcgtt
1561 tgttggggca ctgggcggcg cagccttcct gggcaccgcc atcttcattg aggccgaccg
1621 ccggcgggca cagctgcacg tgcagggcct gctgcacgaa gcagggtcca cagacgaccg
1681 gattgtggtg ccccagcggg gccgctccac ccgcgtgccc gtggccagtg tgctcatctg
1741 agaggctgcc gctcacctac ctgcacatct gccacagctg gccctgggcc caccccacga
1801 agggcctggg cctaacccct tggcctggcc cagcttccag agggaccctg ggccgtgtgc
1861 cagctcccag acactacatg ggtagctcag gggaggaggt gggggtccag gagggggatc
1921 cctctccaca ggggcagccc caagggctcg gtgctatttg taacggaata aaatttgtag
1981 ccagaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//