LOCUS BC038953 1851 bp mRNA linear HUM 07-OCT-2003 DEFINITION Homo sapiens component of oligomeric golgi complex 3, mRNA (cDNA clone MGC:47545 IMAGE:5756412), complete cds. ACCESSION BC038953 VERSION BC038953.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1851) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1851) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 82 Row: k Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 14591930. FEATURES Location/Qualifiers source 1..1851 /db_xref="H-InvDB:HIT000052093" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:47545 IMAGE:5756412" /tissue_type="Blood, adult leukocytes" /clone_lib="NIH_MGC_118" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1851 /gene="COG3" /gene_synonym="SEC34" /db_xref="GeneID:83548" /db_xref="MIM:606975" CDS 33..1367 /gene="COG3" /gene_synonym="SEC34" /codon_start=1 /product="COG3 protein" /protein_id="AAH38953.1" /db_xref="GeneID:83548" /db_xref="MIM:606975" /translation="MAEAALLLLPEAAAERDAREKLALWDRRPDTTAPLTDRQTDSVL ELKAAAENLPVPAELPIEDLCSLTSQSLPIELTSVVPESTEDILLKGFTSLGMEEERI ETAQQFFSWFAKLQTQMDQDEGTKYRQMRDYLSGFQEQCDAILNDVNSALQHLESLQK QYLFVSNKTGTLHEACEQLLKEQSELVDLAENIQQKLSYFNELETINTKLNSPTLSVN SDGFIPMLAKLDDCITYISSHPNFKDYPIYLLKFKQCLSKALHLMKTYTVNTLQTLTS QLLKRDPSSVPNADNAFTLFYVKFRAAAPKVRTLIEQIELRSEKIPEYQQLLNDIHQC YLDQRELLLGPSIACTVAELTSQNNRDHCALVRSGCAFMVHVCQDEHQLYNEFFTKPT SKLDELLEKLCVSLYDVFRPLIIHVIHLETLSELCGILKNEVLEDHVQNNGK" misc_feature 399..878 /gene="COG3" /gene_synonym="SEC34" /note="Region: Sec34-like family. Sec34 and Sec35 form a sub-complex, in a seven protein complex that includes Dor1 (PFAM:PF04124). This complex is thought to be important for tether vesicles to the Golgi" /db_xref="CDD:pfam04136" BASE COUNT 598 a 350 c 383 g 520 t ORIGIN 1 cgctgctgct gaaggccgcg agggcggcgg cgatggcgga ggcggcgctg ttgctgctgc 61 ctgaggcggc ggcggagcgg gacgctaggg aaaagctggc tctctgggat cggagaccgg 121 acacgacggc gccgctgacc gacaggcaga cggactcggt attggagctg aaggcggcgg 181 cagagaactt gccggtgcca gctgagcttc caattgaaga cttgtgcagt ttaacatccc 241 agtcactgcc cattgaactg acttcagtag tgcctgaatc tacagaagac attctcttga 301 agggcttcac ttccttagga atggaagaag aaagaattga aaccgcacag cagtttttct 361 catggtttgc aaagctgcaa actcagatgg atcaagatga aggaactaaa tatagacaga 421 tgagggatta cttgtctggg tttcaggagc agtgtgatgc tatattgaat gatgtaaaca 481 gtgctcttca gcatctggag tctttgcaga aacagtatct ttttgtgtcc aataagacag 541 gaaccctaca tgaagcctgt gaacagctcc taaaagaaca gtcggaactt gttgatctgg 601 ctgaaaacat tcaacaaaag ctttcctatt ttaacgaatt ggaaactatt aacacaaaat 661 tgaattcccc tacattgtcg gtgaatagtg acggatttat acctatgctg gccaagttag 721 atgattgtat aacatatatc tcatctcatc ctaattttaa agattatccc atatatttgc 781 tgaagtttaa acagtgtctt tctaaagctt tgcacctcat gaagacatat actgtgaaca 841 cactacagac cctcacaagt cagttactga aaagggatcc ttcatctgta cctaatgcag 901 acaatgcctt cacattattt tatgtgaaat ttcgagctgc tgcccccaaa gtcagaactc 961 ttattgaaca aatagaactg cggtctgaaa aaatacctga ataccaacaa ctgctaaatg 1021 atatccacca gtgttacctt gatcagcggg agctcctttt gggccctagt attgcttgca 1081 ctgttgcaga gttaaccagc caaaataata gagatcactg tgccttggtt cgtagtggct 1141 gtgccttcat ggttcatgtc tgccaggatg aacaccaact ttacaatgaa tttttcacaa 1201 aaccaacatc aaaattagat gagcttttgg agaaactgtg tgtgtcattg tatgatgtct 1261 tcaggccatt gatcattcat gttattcact tagagactct gtcggaactt tgtgggattc 1321 ttaaaaatga agtgcttgaa gatcatgtgc agaacaatgg taaatgagta gaaatgatca 1381 ttttaagtta tatcactggc tcaatgaatt tgaaaaaaaa ataagtgctt cttccctcac 1441 cccactaaat agataaattt aatatttttg aagcttggct tgatgcctta ccccttcttg 1501 aatgaagttg caccttattc tgtcactaaa gacacaatca gatagggaaa gaatcttaaa 1561 atctgggtaa aattagtaat aaaataatta tagtcagttt tctttctggc atctggaatc 1621 cagatagaac acatcgttac ttttgggtta ggcatttcta gcacactgtt accagaatac 1681 aaaatacata aataaataat tgaatatatt gtatactttt gattaaaaaa caggaattgt 1741 ttttgtgtat attcataata atagttgatc tgttttgaaa ttacaaataa agaaaagcgg 1801 ttctctggaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a //