LOCUS BC038846 905 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens lymphocyte antigen 86, mRNA (cDNA clone MGC:47723
IMAGE:6015123), complete cds.
ACCESSION BC038846
VERSION BC038846.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 905)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 905)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-OCT-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: m Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55775471.
FEATURES Location/Qualifiers
source 1..905
/db_xref="H-InvDB:HIT000052081"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47723 IMAGE:6015123"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..905
/gene="LY86"
/gene_synonym="dJ80N2.1"
/gene_synonym="MD-1"
/gene_synonym="RP1-80N2.1"
/db_xref="GeneID:9450"
/db_xref="HGNC:HGNC:16837"
/db_xref="MIM:605241"
CDS 45..533
/gene="LY86"
/gene_synonym="dJ80N2.1"
/gene_synonym="MD-1"
/gene_synonym="RP1-80N2.1"
/codon_start=1
/product="lymphocyte antigen 86"
/protein_id="AAH38846.1"
/db_xref="GeneID:9450"
/db_xref="HGNC:HGNC:16837"
/db_xref="MIM:605241"
/translation="MKGFTATLFLWTLIFPSCSGGGGGKAWPTHVVCSDSGLEVLYQS
CDPLQDFGFSVEKCSKQLKSNINIRFGIILREDIKELFLDLALMSQGSSVLNFSYPIC
EAALPKFSFCGRRKGEQIYYAGPVNNPEFTIPQGEYQVLLELYTEKRSTVACANATIM
CS"
BASE COUNT 234 a 229 c 201 g 241 t
ORIGIN
1 ccacgcgtcc gtgtttttct gtgtgtccca tacaggcccc caccatgaag ggtttcacag
61 ccactctctt cctctggact ctgatttttc ccagctgcag tggaggcggc ggtgggaaag
121 cctggcccac acacgtggtc tgtagcgaca gcggcttgga agtgctctac cagagttgcg
181 atccattaca agattttggc ttttctgttg aaaagtgttc caagcaatta aaatcaaata
241 tcaacattag atttggaatt attctgagag aggacatcaa agagcttttt cttgacctag
301 ctctcatgtc tcaaggctca tctgttttga atttctccta tcccatctgt gaggcggctc
361 tgcccaagtt ttctttctgt ggaagaagga aaggagagca gatttactat gctgggcctg
421 tcaataatcc tgaatttact attcctcagg gagaatacca ggttttgctg gaactgtaca
481 ctgaaaaacg gtccaccgtg gcctgtgcca atgctactat catgtgctcc tgactgtggc
541 ctgtagcaaa aatcacagcc agctgcatct cgtgggacct ccaagctcct ctgactgaac
601 ctactgtggg aggagaagca gctgatgaca gagagaggct ctacaaagaa gcgcccccaa
661 agagtgcagc tgctaatttt agtcccagga ccagacatcc ccagactcca cagatgtaat
721 gaagtccccg aatgtatctg tttctaagga gcctcttggc agtccttaag cagtcttgag
781 ggtccatcct ttttctctaa ttggtcgcct cccaccagac tcacctgctt ttcaactttt
841 taggagtgct tcctcacagt taccaagaat aaagaaagct ggccaccata aaaaaaaaaa
901 aaaaa
//