LOCUS BC038842 1490 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens chromosome 1 open reading frame 91, mRNA (cDNA clone
MGC:47790 IMAGE:5742036), complete cds.
ACCESSION BC038842
VERSION BC038842.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1490)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1490)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-OCT-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: i Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361813
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..1490
/db_xref="H-InvDB:HIT000052079"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47790 IMAGE:5742036"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1490
/gene="C1orf91"
/gene_synonym="AASL548"
/gene_synonym="dJ622L5.7"
/gene_synonym="PRO1105"
/gene_synonym="RP4-622L5"
/gene_synonym="RP4-622L5.3"
/db_xref="GeneID:56063"
/db_xref="HGNC:HGNC:28837"
CDS 27..521
/gene="C1orf91"
/gene_synonym="AASL548"
/gene_synonym="dJ622L5.7"
/gene_synonym="PRO1105"
/gene_synonym="RP4-622L5"
/gene_synonym="RP4-622L5.3"
/codon_start=1
/product="C1orf91 protein"
/protein_id="AAH38842.1"
/db_xref="GeneID:56063"
/db_xref="HGNC:HGNC:28837"
/translation="MAASLGQVLALVLVAALWGGTQPLLKRASAGLQRVHEPTWAQQL
LQEMKTLFLNTEYLMPFLLNQCGSLLYYLTLASTDLTLAVPICNSLAIIFTLIVGKAL
GEDIGGKRAVAGMVLTVIGISLCITSSVPWTAELQLHGKGQLQTLSQKCKREASGTQS
ERFG"
BASE COUNT 391 a 379 c 409 g 311 t
ORIGIN
1 cggaagtaga agacagcggc gttgccatgg cggcgtctct ggggcaggtg ttggctctgg
61 tgctggtggc cgctctgtgg ggtggcacgc agccgctgct gaagcgggcc tccgccggcc
121 tgcagcgggt tcatgagccg acctgggccc agcagttgct acaggagatg aagaccctct
181 tcttgaatac tgagtacctg atgccctttc tcctcaacca gtgtggatcc cttctctatt
241 acctcacctt ggcatcgaca gatctgaccc tggctgtgcc catctgtaac tctctggcta
301 tcatcttcac actgattgtt gggaaggccc ttggagaaga tattggtgga aaacgagcag
361 ttgctggcat ggtgctcacc gtgataggaa tttcactctg catcacaagc tcagttccat
421 ggactgcaga actccagctg catggaaagg gccagctgca gactttgagc cagaaatgca
481 aacgggaggc ctctgggact cagtcagagc gctttggctg aatgaggggt ggaaccgagg
541 gaagaaggta gagagctgtg agccccagcc ccacctgact ccagcacacc tggcgagtag
601 tagctgtcaa taaatctatg gtaaacagac aagaggaggt ggaaggccat acagaatgga
661 gccgtgagta tggccagcct ccagctctca gccaggaggt ccccaacccc aaggaaggaa
721 gaaactggaa attaggaact gcttcctcat ttaacaaggt gcttcttttc atgtgatgag
781 gccctgtgaa gaagggacag gatatacaga cgggggcagc tggagacagt tatgatgagt
841 gccggctttg tgtctgagca ttctgctccc atggacatcc ccaacaacag cagggaccaa
901 cctatgtcac tgtcaaaggg cagctgagaa gggcctgagc cccagggacc cctcacctga
961 tgggaatgag agtgtgggga gcttgcttct tggctgaatg gtctgctggg gtctggcata
1021 gaaagcagat ggcttaattc ggtctggttc ctttggagag ggctgggtta cctgggccct
1081 gtggccttgg gcctagagaa gggacactgg gcttggaccc tgattgctgg ccattcttac
1141 ctttcctact ccccagttca ggcttcagag agcccctgac gcctgcagga acatggcaga
1201 ggagacaccg tctgtcttca caaagtacgt cctccctcct tgctgcctct tcccaccagc
1261 ctgacttatc cagggacaga gcagtagatg cctggcactc ctcgatgccc agtgaaacca
1321 gactgtgctt ccccaccccc accaccatgc cccatgctca ctggctcatt tcttgggagg
1381 gcttagagct ggataatata agttcccttg gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1441 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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