LOCUS BC038838 1220 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens proline rich 16, mRNA (cDNA clone MGC:47873
IMAGE:5170587), complete cds.
ACCESSION BC038838
VERSION BC038838.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1220)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1220)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-OCT-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: c Column: 19.
FEATURES Location/Qualifiers
source 1..1220
/db_xref="H-InvDB:HIT000052077"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47873 IMAGE:5170587"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1220
/gene="PRR16"
/gene_synonym="DSC54"
/db_xref="GeneID:51334"
/db_xref="HGNC:HGNC:29654"
CDS 232..936
/gene="PRR16"
/gene_synonym="DSC54"
/codon_start=1
/product="PRR16 protein"
/protein_id="AAH38838.1"
/db_xref="GeneID:51334"
/db_xref="HGNC:HGNC:29654"
/translation="MTDSSKTDTLNSSSSGTTASSLEKIKVQANAPLIKPPAHTSAIL
TVLRKPNPPPPPPRLTPVKCEDPKRVVPTANPVKTNGTLLRNGGLPGGPNKIPNGDIC
CIPNSNLDKAPVQLLMHRPEKDRCPQAGPRERVRFNEKVQYHGYCPDCDTRYNIKNRE
VHLHSEPVHPPGKIPHQGPPLPPTPHLPPFPLENGGMGISHSNSFPPIRPATVPPPTA
PKPQKTILRKSTTTTV"
BASE COUNT 436 a 289 c 221 g 274 t
ORIGIN
1 ggaaacagtg ctgcaggcat acagtgacaa caggacatca ggaaatgccc aagaagtttg
61 ttaggtgctg tgtcatgaat caagtcttca ttttaatgtg ttctaattgt tgtaaaacaa
121 gagggaatgg tatttggaat ttagctatat ttatcttctc aatcaaattc tacttcagag
181 gtggttgacc agattgacac cctgacctct gacctacagc tggaggatga gatgactgac
241 agctccaaaa cggacacgct gaatagtagc tcaagtggca caacagcctc cagcctagag
301 aagatcaaag tgcaggctaa tgcaccgctt attaaacccc cagcacacac atctgctatc
361 ctcacggtcc tgagaaagcc aaaccctcca ccacctcctc caaggttgac acctgtgaag
421 tgtgaagacc ccaaaagggt ggttccaact gccaatcctg taaaaaccaa tggcaccctt
481 ctacgaaatg gaggcttacc aggtggacct aacaaaattc caaatggaga tatctgctgc
541 atacccaaca gtaacttgga caaggctcca gtccagcttc tgatgcatag acctgaaaaa
601 gacagatgtc cccaggcagg gcctcgagaa cgagttcggt ttaatgaaaa agtacagtac
661 catggctatt gtcctgactg tgatacccgg tataacataa aaaacaggga ggtccactta
721 cacagtgaac ctgtccaccc accgggaaag attcctcacc aaggccctcc cctccctcct
781 acaccccatc tccctccttt cccactagaa aatgggggaa tgggaataag ccacagtaac
841 agcttccccc ctatcagacc tgcaactgtg cctcctccca ctgcaccaaa accacagaag
901 acgatcttga ggaagtcaac cactacaacc gtgtgatgta tgccattaaa aaaattgttt
961 ttttaatttt ctatattata aacataaaat aagtaatgag cactttctac tcaagcaata
1021 aaaagcccaa atatattaat cctgcattca gcaaagtggc ataaaaatca cctggtaagt
1081 atgcagcaca ttgcttatat cctgggtatg cattatttta aatgttgtat cattaaaaac
1141 ctcagaatga tgaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1201 aaaaaaaaaa aaaaaaaaaa
//