LOCUS BC038836 1149 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens chromosome 12 open reading frame 60, mRNA (cDNA clone
MGC:47869 IMAGE:5168757), complete cds.
ACCESSION BC038836
VERSION BC038836.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1149)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1149)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-OCT-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: c Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31343594.
FEATURES Location/Qualifiers
source 1..1149
/db_xref="H-InvDB:HIT000052076"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47869 IMAGE:5168757"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1149
/gene="C12orf60"
/db_xref="GeneID:144608"
/db_xref="HGNC:HGNC:28726"
CDS 205..942
/gene="C12orf60"
/codon_start=1
/product="chromosome 12 open reading frame 60"
/protein_id="AAH38836.1"
/db_xref="GeneID:144608"
/db_xref="HGNC:HGNC:28726"
/translation="MSSESEKDKERLIQAAKMFFFHVQDLASVINTLTELFSRSMNTQ
ILLMAVRNNSYIKDFFEQMLKIFKEMQSVVDARHDKIQKESLCSKVAMAMCSVVQKST
NVEELHQSAKEVFKSAHTPVIISVLNSSNILGSLESSLSHLMKFPIMNLQLSDFYTED
TKEQSDVTTSERTRSPPGSSKTTMIDTLKKLQDVLKTEDSKNPTKSAADLLEQIVKAM
GPILEILQKAIKTMEMNISVFKKASDK"
BASE COUNT 392 a 210 c 228 g 319 t
ORIGIN
1 tccaggacca gagtctcttc cggttccata caatactcaa ttggttggtt gtcggctaag
61 agcccgcctc attgcgctca tctagtacaa taggaattag aagaagatag ctgctaactg
121 agtggctgac ggtcctgtct ctcgagttgg aggcatcttg acttagttgc tgggagcctg
181 tgttggaact tatttgttgg agaaatgtct tcagagtcag aaaaggataa agagagactg
241 attcaagctg ccaaaatgtt cttctttcat gtacaagatc ttgcttctgt cataaacaca
301 ctgactgaat tgtttagccg cagtatgaat actcaaatcc ttttgatggc tgtgagaaac
361 aatagttaca ttaaggattt ttttgagcaa atgctcaaaa tttttaagga gatgcaatct
421 gtagtggatg caagacatga caaaattcaa aaggagtctt tatgttccaa ggttgcaatg
481 gccatgtgct ctgtggttca gaagagtacc aatgtagagg agttgcatca gtcagctaaa
541 gaagtattca aaagtgccca tacgccagtc atcatctctg tgctaaacag cagtaacatc
601 cttgggagtc tggaatcttc tctttcacac ttgatgaaat tccccatcat gaatcttcaa
661 ttaagtgact tctatacaga agacaccaaa gagcaatcag atgtcaccac atctgagaga
721 accagaagtc ctccaggttc ttccaaaacc actatgatag acaccttgaa aaaactgcag
781 gatgtactaa aaactgagga ttccaaaaat cccacaaagt cagcagcaga tttgttggaa
841 caaattgtca aggctatggg accaatctta gagatcctcc aaaaagcgat aaagactatg
901 gaaatgaata tttctgtgtt taagaaagcc agtgacaagt agggatgcaa cagaaatgtt
961 catttctgtc agaaaactac ttaaaatctt atggtttttc atagtagttt ctaagatctt
1021 ttggtgccaa gcatgtgcta tgttagaaca taagtacaca aaagtcatct ggcaaaacat
1081 ttacctgtag ttttgcttta ttaaaataaa aagaaataat taaaaaaaaa aaaaaaaaaa
1141 aaaaaaaaa
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