LOCUS BC038716 1108 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens peptidylprolyl isomerase (cyclophilin)-like 6, mRNA
(cDNA clone MGC:41939 IMAGE:5268756), complete cds.
ACCESSION BC038716
VERSION BC038716.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1108)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1108)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 74 Row: g Column: 4.
FEATURES Location/Qualifiers
source 1..1108
/db_xref="H-InvDB:HIT000052066"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41939 IMAGE:5268756"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1108
/gene="PPIL6"
/gene_synonym="bA425D10.6"
/gene_synonym="dJ919F19.1"
/gene_synonym="MGC41939"
/db_xref="GeneID:285755"
/db_xref="HGNC:HGNC:21557"
CDS 41..976
/gene="PPIL6"
/gene_synonym="bA425D10.6"
/gene_synonym="dJ919F19.1"
/gene_synonym="MGC41939"
/codon_start=1
/product="peptidylprolyl isomerase (cyclophilin)-like 6"
/protein_id="AAH38716.1"
/db_xref="GeneID:285755"
/db_xref="HGNC:HGNC:21557"
/translation="MARPQPCGPPHARCGSPSLPERPLQVKVVGLFSCPNFQIAKSAA
ENLKNNHPSKFEDPILVPLQEFAWHQYLQEKKRELKNETWEYSSSVISFVNGQFLGDA
LDLQKWAHEVWDIVDIKPSALYDALTEDFSAKFLRDTKHDFVFLDICIDSSPIGRLIF
ELYCDVCPKTCKNFQVLCTGKAGFSQRGIRLHYKNSIFHRIVQNGWIQGGDIVYGKGD
NGESIYGPTFEDENFSVPHNKRGVLGMANKGRHSNGSQFYITLQATPYLDRKFVAFGQ
LIEGTEVLKQLELVPTQNERPIHMCRITDSGDPYA"
BASE COUNT 346 a 200 c 251 g 311 t
ORIGIN
1 tggtagtgtt tggggtcacc gggcgtcccc gggcgcggcc atggcaaggc cgcagccgtg
61 cgggcccccg cacgctaggt gcggctcgcc gtcgctgccg gagcggccgc tgcaggtgaa
121 ggtggtgggg ctcttcagct gccccaactt tcagattgcg aagagcgccg ctgagaatct
181 gaagaataat catccatcca aatttgaaga tcctatatta gttcctcttc aagaatttgc
241 atggcatcaa tatctacagg agaaaaaaag ggaactcaaa aatgaaacct gggaatattc
301 ttcctctgtg atttcttttg ttaatggtca gtttctgggt gatgcattgg atctgcagaa
361 atgggcccac gaggtgtggg atatagttga cattaaaccc tctgcacttt atgacgcact
421 cactgaggat ttttccgcta agttcttaag agacaccaag catgatttcg tgtttttgga
481 catttgtatt gattcttctc caattggaag attgattttt gagctatact gtgatgtgtg
541 tcccaaaaca tgtaaaaatt ttcaggtctt gtgcacagga aaagcagggt tttctcaacg
601 tggcataaga ctacattaca aaaattccat ttttcatcga atagtacaga atggctggat
661 acaaggaggg gatatagtgt atggaaaagg agataatgga gagtcgattt atggtccaac
721 atttgaagat gaaaactttt cagttcctca taataaaaga ggagtacttg gaatggccaa
781 caaaggccgt cacagcaacg ggtcacaatt ctatatcaca ctgcaagcaa ctccttatct
841 agatagaaaa tttgtggctt ttgggcaact gattgaagga acagaagtgc ttaaacaact
901 agaattagtt ccaacacaga atgaaagacc aatacatatg tgtagaatta ctgacagtgg
961 agatccttat gcttgatttt catatcaata ttttctgtga taatttatta ctttgtatct
1021 gatcagctgt ttgtggattt aattaaaaag tacttgataa attgtaattt gaaaaaaaaa
1081 aaaaaaaaaa agaaaaaaaa aaaaaaaa
//