LOCUS BC038669 3581 bp mRNA linear HUM 03-NOV-2008 DEFINITION Homo sapiens Sp8 transcription factor, mRNA (cDNA clone MGC:41921 IMAGE:5259444), complete cds. ACCESSION BC038669 VERSION BC038669.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3581) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3581) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-OCT-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 73 Row: a Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 39812495. FEATURES Location/Qualifiers source 1..3581 /db_xref="H-InvDB:HIT000052059" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:41921 IMAGE:5259444" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3581 /gene="SP8" /gene_synonym="BTD" /db_xref="GeneID:221833" /db_xref="HGNC:HGNC:19196" /db_xref="MIM:608306" CDS 89..1489 /gene="SP8" /gene_synonym="BTD" /codon_start=1 /product="SP8 protein" /protein_id="AAH38669.1" /db_xref="GeneID:221833" /db_xref="HGNC:HGNC:19196" /db_xref="MIM:608306" /translation="MATSLLGEEPRLGSTPLAMLAATCNKIGSPSPSPSSLSDSSSSF GKGFHPWKRSSSSSSASCNVVGSSLSSFGVSGASRNGGSSSAAAAAAAAAAAAAALVS DSFSCGGSPGSSAFSLTSSGGSSAHSQDGSHQPVFISKVHTSVDGLQGIYPRVGMAHP YESWFKPSHPGLGAAGEVGSAGASSWWDVGAGWIDVQNPNSAAALPGSLHPAAGGLQT SLHSPLGGYNSDYSGLSHSAFSSGASSHLLSPAGQHLMDGFKPVLPGSYPDSAPSPLA GAGGSMLSAGPSAPLGGSPRSSARRYSGRATCDCPNCQEAERLGPAGASLRRKGLHSC HIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRF ACPVCNKRFMRSDRLSKHVKTHSGGGGGGGSAGSGSGGKKGSDTDSEHSAAGSPPCHS PELLQPPEPGHRNGLE" BASE COUNT 793 a 995 c 913 g 880 t ORIGIN 1 attgtattgc acacctctaa aaaaaacact gcctctgatt tatcaatata aaaaagatcc 61 tctgagagga ggagggcact tttgtgtgat ggcaacttca cttctagggg aagaaccgag 121 gttgggatcg actcctctgg ccatgcttgc cgctacctgt aataagatag gcagccccag 181 cccgtctccc tcctccctct cggacagctc ttcttccttc ggcaaaggct tccacccctg 241 gaaacgctcc tcgtcctctt cttccgccag ctgcaacgta gtgggttcca gtctctcaag 301 cttcggcgtg tccggggcct ccaggaacgg cggctcgtcc tcggcggctg cggcggccgc 361 ggcagcagcc gcggctgccg cggccctggt gtccgactcg ttcagctgcg gcggctcgcc 421 tggctccagc gccttctccc tcacctccag cggcggctcc tccgcgcact cgcaggacgg 481 ctcccaccag ccggtgttca tctccaaggt gcacacctct gtggacgggc tgcagggcat 541 ctacccgcgg gtgggcatgg cgcacccgta cgagtcgtgg tttaagccct cgcacccggg 601 cctgggtgct gcgggcgagg tgggctcggc cggcgcctcc agctggtggg acgtgggggc 661 cggctggatc gacgtgcaga acccgaacag cgcggctgcg ctgcccggct cgctgcaccc 721 tgccgccggg gggctccaaa cctcgctgca ctcgccgctc ggaggctaca actcggatta 781 ctcgggcctg agtcactcgg ccttcagcag cggcgcctcc tcgcacctgc tcagccccgc 841 cgggcagcac ctcatggacg gcttcaagcc agtgctaccc ggctcctacc cggactcggc 901 cccgtcgccg ctggccggcg cggggggctc catgttgagc gctgggcctt cggcgccgct 961 ggggggctcc ccgcgctcct cagctcgccg ctactccggc cgcgccacct gcgactgccc 1021 caactgccag gaggcagagc ggctgggccc tgccggggcg agcttgcggc gcaagggcct 1081 gcacagctgc cacatcccgg gctgcggcaa ggtgtacggc aagacttcgc acctcaaggc 1141 gcacctgcgc tggcacacgg gcgagcggcc cttcgtgtgc aactggcttt tctgcggcaa 1201 gcgcttcacg cgctccgacg agctgcagcg gcacctgcgg acccacaccg gcgagaagcg 1261 cttcgcctgt ccagtttgca acaagcgctt catgcgcagc gaccgcctca gcaagcacgt 1321 gaagacgcac agtggcggcg gcggcggcgg cggctcggcg ggctcgggca gcggcggcaa 1381 gaagggcagc gacaccgaca gcgagcacag cgccgcgggc agcccgccct gccactcccc 1441 agagctgctg cagccccccg agcccgggca ccgcaacggc ctagagtgac gcccaccctg 1501 cgcccgcccc tctccccgac ctcctcccac caagtcctct tgggccctgt ctgtccggac 1561 ttcaactcca gcctttccct attgcatccg actcgctctc tgtctctttc tgtttctgcc 1621 cctcttcctt cttccttctg tgacttaact ttgtaaaggg gatatggaca agtaagtaac 1681 acgcatcgct gtcccgggcc ctggctttcc ctttccacgg gtaacgctgc ctgaacccgt 1741 tgcagccgga acccgcgcct cgtcgggcct ttatttctcg ttctctcttc cttgtcctcc 1801 cctcctccac cccccaggtt gtgaagggcg taacttttag agggaagcgg ccactggagg 1861 tagagctgga ctaatccagt gcctggtaga cagcgggcct cggcgcgggc aggagcggct 1921 cggctgagca agcctgagcc ggagcggtgg agagggagag gctggaggcc tgggcagaac 1981 agcgccgccc gggcagacgg ctgcttggtt ccagagccgc tgtactgagc acctcggctt 2041 cggagcaccc tgccaggccc ctgggcatcg ccggacgtcc tactcaggct gtcggggctt 2101 ggtgggggtg cacttttggc agccccgaga cccagagttt gtagagttta gatctcccaa 2161 tgtcagctct gcctcttttt ctttgttccc tgaggtggaa ccgatgcaag tttcagcaaa 2221 gggcagtctt gtcgaatcgc tgcagcagct ttctttcatc tttatagcat atattttatt 2281 tttaaaaaaa ctagggggaa aatagcaacc ttccatttgg tttcccttct ataatagttt 2341 tttcctctaa cggggagcaa ctctttctct cgaaactgct aatattgatc ccaaagttac 2401 tttgactgca ttaacttaac ttacggggtg ggggcggggg tgagggtagg tgcttttttc 2461 ttatgcaaaa atactccttt ccggtgagac cagattaact atctccatgt ttgtcctttt 2521 ctacctcgtt ttttcaccac tcccaaacat aacctcccaa tcttttttgt tagtccggcc 2581 gtcaatttgt atagtaccaa tttctgtaaa ttctctcaat tcattgaaga tcgtagggtt 2641 aaactttttt gtgtgtgatt taaacttaca aacaagtgaa gaagctatcg tttatttcag 2701 acgaggctgt agtttaaata ccaaaagagg gaaaataaaa aagaaccttt gtaaaatata 2761 tctgaaccta atggtttgta caactggaga atcgttctag attagttacc aattaaatat 2821 aactccgcca gtgtaagggt gtgaggtgca gttgtccagg agacgatttt gtatagtatt 2881 tttcttgtac attacttcca gtaaatattt gaaaatatat tgaagtaaac ttgatttttt 2941 ttttttgtca caagaaaata ttaagagtta ttgttgcagt tctgatgagc tgcaggtttt 3001 ttgaactcac ttctggaggt gcagagccac aaacgcactt tcggggccta gttttgctcg 3061 aatatgaatt tagataggta tcaagctgta actaagacaa tatttgataa atgttggatg 3121 acatttaatt taatggagca tgtacttatt tgcatttgct ggcagttcag gcatagttaa 3181 agtgagagtt ctcctatatt tcataataag tgggtctgcc aaaacccatg tattaaataa 3241 attgtccaag tgaaactcga ctaactttgg cctttgtgta tttcctgaag gtaatattgt 3301 taactgttaa taaatacttc tgacactaca tttaaatgtt tgcagattct gcaaactaat 3361 tgctcattgt aatgttgaaa taatttggat atttcacatt gaaatgaaaa gcctttctct 3421 ggagcatttt agatttgcat tttaaatgca tgaaatgtaa ttgatttatt tgtaatattt 3481 taaatggtat taataaactc agataaaaga caaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3541 aaaaaaaaaa aaaaaaaaaa aaaagaaaaa aaaaaaaaaa a //