LOCUS       BC038598                2411 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens serine hydroxymethyltransferase 1 (soluble), mRNA
            (cDNA clone MGC:46169 IMAGE:4523709), complete cds.
ACCESSION   BC038598
VERSION     BC038598.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2411)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2411)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 78 Row: b Column: 20
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 22547185.
FEATURES             Location/Qualifiers
     source          1..2411
                     /db_xref="H-InvDB:HIT000052057"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:46169 IMAGE:4523709"
                     /tissue_type="Testis, embryonal carcinoma"
                     /clone_lib="NIH_MGC_92"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..2411
                     /gene="SHMT1"
                     /gene_synonym="CSHMT"
                     /gene_synonym="MGC15229"
                     /gene_synonym="MGC24556"
                     /gene_synonym="SHMT"
                     /db_xref="GeneID:6470"
                     /db_xref="HGNC:HGNC:10850"
                     /db_xref="MIM:182144"
     CDS             69..1520
                     /gene="SHMT1"
                     /gene_synonym="CSHMT"
                     /gene_synonym="MGC15229"
                     /gene_synonym="MGC24556"
                     /gene_synonym="SHMT"
                     /codon_start=1
                     /product="serine hydroxymethyltransferase 1 (soluble)"
                     /protein_id="AAH38598.1"
                     /db_xref="GeneID:6470"
                     /db_xref="HGNC:HGNC:10850"
                     /db_xref="MIM:182144"
                     /translation="MTMPVNGAHKDADLWSSHDKMLAQPLKDSDVEVYNIIKKESNRQ
                     RVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQ
                     AYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKI
                     SATSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLIIAGTSCYSRNLEYARLRKIA
                     DENGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVKSV
                     DPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTLEFKVYQHQVVAN
                     CRALSEALTELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGD
                     RSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDTGVRATLKEFKE
                     RLAGDKYQAAVQALREEVESFASLFPLPGLPDF"
BASE COUNT          630 a          606 c          615 g          560 t
ORIGIN      
        1 ccacgcgtcc ggtggcaccg gcggcggcgt aggacggagg cgtcgctagg cagcttcgaa
       61 ccagtgcaat gacgatgcca gtcaacgggg cccacaagga tgctgacctg tggtcctcac
      121 atgacaagat gctggcacaa cccctcaaag acagtgatgt tgaggtttac aacatcatta
      181 agaaggagag taaccggcag agggttggat tggagctgat tgcctcggag aatttcgcca
      241 gccgagcagt tttggaggcc ctaggctctt gcttaaataa caaatactct gaggggtacc
      301 cgggccagag atactatggc gggactgagt ttattgatga actggagacc ctctgtcaga
      361 agcgagccct gcaggcctat aagctggacc cacagtgctg gggggtcaac gtccagccct
      421 actcaggctc ccctgcaaac tttgctgtgt acactgccct ggtggaaccc catgggcgca
      481 tcatgggcct ggaccttccg gatgggggcc acctgaccca tgggttcatg acagacaaga
      541 agaaaatctc tgccacgtcc atcttctttg aatctatgcc ctacaaggtg aacccagata
      601 ctggctacat caactatgac cagctggagg agaacgcacg cctcttccac ccgaagctga
      661 tcatcgcagg aaccagctgc tactcccgaa acctggaata tgcccggcta cggaagattg
      721 cagatgagaa cggggcgtat ctcatggcgg acatggctca catcagcggg ctggtggcgg
      781 ctggcgtggt gccctcccca tttgaacact gccatgtggt gaccaccacc actcacaaga
      841 ccctgcgagg ctgccgagct ggcatgatct tctacaggaa aggagtgaaa agtgtggatc
      901 ccaagactgg caaagagatt ctgtacaacc tggagtctct tatcaattct gctgtgttcc
      961 ctggcctgca gggaggtccc cacaaccacg ccattgctgg ggttgctgtg gcactgaagc
     1021 aagctatgac tctggaattt aaagtttatc aacaccaggt ggtggccaac tgcagggctc
     1081 tgtctgaggc cctgacggag ctgggctaca aaatagtcac aggtggttct gacaaccatt
     1141 tgatccttgt ggatctccgt tccaaaggca cagatggtgg aagggctgag aaggtgctag
     1201 aagcctgttc tattgcctgc aacaagaaca cctgtccagg tgacagaagc gctctgcggc
     1261 ccagtggact gcggctgggg accccagcac tgacgtcccg tggacttttg gaaaaagact
     1321 tccaaaaagt agcccacttt attcacagag ggatagagct gaccctgcag atccagagcg
     1381 acactggtgt cagagccacc ctgaaagagt tcaaggagag actggcaggg gataagtacc
     1441 aggcggccgt gcaggctctc cgggaggagg ttgagagctt cgcctctctc ttccctctgc
     1501 ctggcctgcc tgacttctaa aggagcgggc ccactctgga cccacctggc gccacagagg
     1561 aagctgcctg ccggaggacc cccacctgag agatggatga gctgctccaa aggggaactg
     1621 ttgacactcg ggccctttga gggggtttct tttggacttt tttcatgttt tcttcacaaa
     1681 tcaaaatttg tttaagtctc attgttagta attctgggac aggttattaa aggatttaaa
     1741 tttgaacctg gctttctcac agctggacat aattctagga aaataaaata ctatgtcgcc
     1801 acttggtcat aatcatttag atggtggtgt agggcaaagc tgttagaaag attgtagcgt
     1861 tttactctcc ctgggctttc ctccgccttg ctgcaacaga gaggaaatgc ccatgtccac
     1921 agcttgtaca cactgccccc tcactatctt gttatccagt ggcatgccaa aggagaactg
     1981 aattagcttc tgaggcttct gctgtaaatc agaagtgtat gttagtcaag agtaaacaag
     2041 atgcacccag tatggtggga gggttttgct gtcagtagct caaagtatgg tgtagaaatg
     2101 gcctcctccc tccatcctgg gaagtcccag tcccatcctg gtgtgagaat caaccaggct
     2161 ttcctgctcc acctgagata accaactccc tcccgtaatc aggaagccaa atgtcacctt
     2221 cccaaagaaa ttttattttc acgtagctga agtgcaaaac atagatgacc atttttaata
     2281 agcacaatca aatttttaac cacagaatgt ctacaagaat tatagcttta aaaaatacaa
     2341 ccaattttta tatttcaaaa atatttgaac tcaaataaat taatttctta aaaagtaaaa
     2401 aaaaaaaaaa a
//