LOCUS       BC038516                3684 bp    mRNA    linear   HUM 17-JUL-2006
DEFINITION  Homo sapiens PHD finger protein 13, mRNA (cDNA clone MGC:43399
            IMAGE:5266750), complete cds.
ACCESSION   BC038516
VERSION     BC038516.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3684)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3684)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-OCT-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 73 Row: p Column: 1
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 24432092.
FEATURES             Location/Qualifiers
     source          1..3684
                     /db_xref="H-InvDB:HIT000052049"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:43399 IMAGE:5266750"
                     /tissue_type="Testis"
                     /clone_lib="NIH_MGC_97"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..3684
                     /gene="PHF13"
                     /gene_synonym="MGC43399"
                     /gene_synonym="PHF5"
                     /gene_synonym="SPOC1"
                     /db_xref="GeneID:148479"
                     /db_xref="HGNC:HGNC:22983"
     CDS             383..1285
                     /gene="PHF13"
                     /gene_synonym="MGC43399"
                     /gene_synonym="PHF5"
                     /gene_synonym="SPOC1"
                     /codon_start=1
                     /product="PHD finger protein 13"
                     /protein_id="AAH38516.1"
                     /db_xref="GeneID:148479"
                     /db_xref="HGNC:HGNC:22983"
                     /translation="MDSDSCAAAFHPEEYSPSCERRRTVEDFNKFCTFVLAYAGYIPY
                     PKEELPLRSSPSPANSTAGTIDSDGWDAGFSDIASSVPLPVSDRCFSHLQPTLLQRAK
                     PSNFLLDRKKTDKLKKKKKRKRRDSDAPGKEGYRGGLLKLEAADPYVETPTSPTLQDI
                     PQAPSDPCSGWDSDTPSSGSCATVSPDQVKEIKTEGKRTIVRQGKQVVFRDEDSTGND
                     EDIMVDSDDDSWDLVTCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQK
                     CRDSKFDIRRSNRSRTGSRKLFLD"
BASE COUNT          800 a          963 c         1012 g          909 t
ORIGIN      
        1 agtcgccacc cagactacat ttcccgacag gcctcccggc tctcccgccc tccctcccga
       61 aacacgagcc gaactgggcg tcaggtcggg gagccggtcg ggttcccgct caccgccgcc
      121 gccgccgccc cctgcagcca ctctcccgcc tctaccgccg cgggagctgc atcgtccact
      181 ccggtcggcg gtggaaccgc cagtccgggg tcacagagct tgagaagcga cgcgctgagc
      241 cccccatcac ctccagcccg ggcgacccct cccgggtccg ccctcgccct gcgcagccgc
      301 ccgagccccc agccccgggc ggccccgctc cagcatccca gctcctgcac tctcgcagcc
      361 gccgccgccc cccgcccgga acatggactc tgactcttgc gccgccgcct tccacccgga
      421 ggaatactcc cccagttgcg agaggcgcag gaccgtggaa gacttcaaca aattctgcac
      481 ctttgtcttg gcctatgctg gctacatccc ttatccgaag gaggaactcc ctttaaggag
      541 cagccccagc cctgctaaca gcactgctgg taccattgac agcgacggct gggacgcggg
      601 tttctcagac atcgcgtcct cagtgccctt gccagtctct gaccgctgct ttagccacct
      661 gcagcctact ctcttgcagc gagccaagcc cagtaacttc ctgctggaca gaaagaaaac
      721 ggacaagctg aagaagaaga agaagaggaa gcgcagggac agtgatgcgc ctgggaaaga
      781 ggggtacagg gggggcttgc tgaagctgga agccgctgac ccctacgtgg agacccccac
      841 gagtcccacc ttgcaggata tcccccaggc tcccagcgac ccctgctcgg gctgggactc
      901 cgatactccc tcgagtggat cttgtgccac tgtgtcacct gatcaggtca aagaaataaa
      961 aactgaaggc aaacggacta tcgtccggca gggaaagcag gtggtgttcc gagatgagga
     1021 cagcactggc aatgatgagg acatcatggt ggactcagat gacgattcct gggacctcgt
     1081 gacctgcttc tgcatgaagc catttgccgg ccgccccatg atcgagtgta atgagtgcca
     1141 cacctggatt cacctgtcct gtgcgaaaat ccggaaatcc aatgttccag aagtgtttgt
     1201 ctgccaaaag tgccgggact ccaagtttga catccgccgt tccaaccgct cgcggacggg
     1261 ctcccggaag ctgttcctgg actgactgct ggctggcgag gaggctgcga gcgtggaatc
     1321 ggaagcgacc gtgggctttt ttgcccttct cttagttgag cacagaaccc tcagctctgg
     1381 tgcgggcaga tccctgccat ttaggtgcct aagcaaaagg acaggctgtc caaggtagaa
     1441 actgtacata gccggtgacc gaatgcgacc tttgccagcc agagctgctg ccagagctgc
     1501 gttccctgca gtggaggtgg actggacacc cacgtgcagc gggtttggct catttgaaaa
     1561 tgagggtccg tggtagctgt gcgttttgct atcattgcta agagattccc gctgattggg
     1621 ctcagtgcca gctgttattc tgcttccact gtgttgggga gaggtgttcg gtttccccag
     1681 cctgttaatg aacagccata cgtgtaagct ttttcttgag tgttaagtct tttaccaaaa
     1741 gtgtctgtac agcagccatc caagttgccc ctacttagtg gcttgccctc tgcctgcctc
     1801 agctgctgcc tgaccggctg ggggaggcac tggcgggagg cctcgggctc ccctggaagg
     1861 gcgctgggct ggcgggtcag ctggtggttc ttaggtttcc ttctgtttgt taaaagggac
     1921 aatgtggcca cttctctgtg gaaagggagt tggttggggg gttgagatgg cccgtgttca
     1981 taactcagtt tcctgttttg cacgatgtaa aaaccctgtc tttttgcacg atacagccaa
     2041 aagtattggc tgatttcttg ctgagtgccc tcttagttgg tgtgtgaggt cttggtgggc
     2101 tcaggccagc tgtttgcgag tgtgggaact cataggttct gtctttgtct cttcctttca
     2161 cctcattctg gtagcagcat aaaggttagg caatcactgg gacccgcatg gtgttcctcc
     2221 aaagaatagg gtaaaggaga gctgggaggg agccctctcc gttgggtgac tcttgtgtgc
     2281 cctttagaca ggctggcctg ccggttccac agggtacagt taggacttga gtctttcttt
     2341 ttctgttttg agttggtgag tgagtgatag ggtaacatgg gccttcagga tgaccccttg
     2401 gaactgtgcc gagttcctta aatctcagct gggatcctgg acctgggagg cccctgtgag
     2461 ggccagctct ggaaaaacct gggagttgat gccggaggct gtggaagaac tctgctcgag
     2521 ggcagggtgc cctggaacac tggtagttct ggggctggga gggagagggg ctccggcttt
     2581 ctctgaaatg aacactgctc ttcagcagtt caagtacttg ttctcaaaac attttctaat
     2641 tgattggtag gttttcataa gcattgtttc tttaaggcat ggaaagggaa gaatgctcaa
     2701 gcaagtcatg tttgttttca gtgggatggg cccgcgttct cactgctggg ggcttcccct
     2761 tcatgtggca cctttgtgcc aggccaccag gcagactctt cccaccttct cccactgaag
     2821 caccaagagg cttgaaccgt aatttggcta atcagaggca ttttttttgt cctagtatct
     2881 ttcacacttg tccaaccgtc ttattttttt aaaagttctg ttgcttgtat taacacgaaa
     2941 ctagagagaa atagtttctg aagccagttt attgtgaaga tccccaaggg ggaggttcgg
     3001 tagagaaaaa tagtaagctg gtttagaaac tgacgagggc aaacagccag gacgcattgg
     3061 agaggaattt gccaaagatc taccctgaga taacgcctgt ccagtgtctt caccacgtga
     3121 ataaccagcg ctccaaagtg tttttctgct ttgaaaaaaa aaattccaca agcttttaaa
     3181 ggtgcattta agaatccatg tgactttaga atggaactgc cggccctggc aactgtcacg
     3241 tgtgctagaa ggttcgatgc ctctggaatg catgtgatac tcatctccat tttgtttcct
     3301 tgattgcatt tttgttcttt tagcagatct gtccctgtgg gtggtgtcta agaagtcgga
     3361 caccttggtt tttgtgttag attgagctgg gcagctgcaa tcagcttctt tatatgcaaa
     3421 ttaggcacga cccatctgtg gttcctggtt ggtggctaat gaagtgaggg gagggaggga
     3481 tgtcacccca aaagtaggcc ctcccattgg ctttggccag gccagacact tcacatcgtt
     3541 tacatggttc tgtgtaattt taaagtttat gtgtataaag cgaagctgtt tctgtgaaac
     3601 tgtatatttt gtaaataaat atattgctac tttgaggttc atgaaaaaaa aaaaaaaaaa
     3661 aaaaaaagaa aaaaaaaaaa aaaa
//