LOCUS BC038515 2737 bp mRNA linear HUM 03-NOV-2006
DEFINITION Homo sapiens coiled-coil domain containing 110, mRNA (cDNA clone
MGC:43395 IMAGE:5266693), complete cds.
ACCESSION BC038515
VERSION BC038515.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2737)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2737)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-OCT-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 73 Row: p Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22749514.
FEATURES Location/Qualifiers
source 1..2737
/db_xref="H-InvDB:HIT000052048"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:43395 IMAGE:5266693"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2737
/gene="CCDC110"
/gene_synonym="KM-HN-1"
/gene_synonym="KMHN1"
/gene_synonym="MGC33607"
/db_xref="GeneID:256309"
/db_xref="HGNC:HGNC:28504"
/db_xref="MIM:609488"
CDS 17..2407
/gene="CCDC110"
/gene_synonym="KM-HN-1"
/gene_synonym="KMHN1"
/gene_synonym="MGC33607"
/codon_start=1
/product="CCDC110 protein"
/protein_id="AAH38515.1"
/db_xref="GeneID:256309"
/db_xref="HGNC:HGNC:28504"
/db_xref="MIM:609488"
/translation="MSPEKQHREEDEVDSVLLSASKILNSSEGVKESGCSDTEYGCIA
ESENQIQPQSALKVLQQQLESFQALRMQTLQNVSMPTENQEENLSMEKSHHFEDSKTL
HSVEEKLSGDSVNSLPQSVNVPSQIHSEDTLTLRTSTDNLSSNIIIHPSENSDILKNY
NNFYRFLPTAPPNVMSQADTVILDKSKITVPFLKHGFCENLDDICHSIKQMKEELQKS
HDGEVALTNELQTLQTDPDVHRNGKYDMSPIHQDKMNFIKEENLDGNLNEDIKSKRIS
ELEALVKKLLPFRETVSKFHVHFCRKCKKLSKSEMHRGKKNEKNNKEIPITGKNITDL
KFHSRVPRYTLSFLDQTKHEMKDKERQPFLVKQGSIISENEKTSKVNSVTEQCVAKIQ
YLQNYLKESVQIQKKVMELESENLNLKSKMKPLIFTTQSLIQKVETYEKQLKNLVEEK
STIQSKLSKTEEYSKECLKEFKKIISKYNVLQGQNKTLEEKNIQLSLEKQQMMEALDQ
LKSKEHKTQSDMAIVNNENNRMSIEMEAMKTNILLIQDEKEMLEKKTHQLLKEKSSLG
NELKESQLEIIQLKEKERLAKTEQETLLQIIETVKDEKLNLETTLQESTAARQIMERE
IENIQTYQSTAEENFLQEIKNAKSEASIYKNSLSEIGKECEMLSKMVMETKTDNQILK
EELKKHSQENIKFENSISRLTEDKILLENYVRSIENERDTLEFEMRHLQREYLSLSDK
ICNQHNDPSKTTYISRREKFHFDNYTHEDTSSPQSRPLASDLKGYFKVKDRTLKHH"
BASE COUNT 1127 a 447 c 489 g 674 t
ORIGIN
1 agcgggagcc gcggcgatga gcccggaaaa gcagcaccgg gaagaggatg aagttgactc
61 cgttctcctt tcagcgtcca agatcctaaa ttcttcggag ggggtgaagg aaagtggctg
121 cagtgacaca gaatatggct gcatagcaga atcagaaaat caaatccaac cacaatcagc
181 attgaaagtc cttcagcagc agttggaatc atttcaggct ttgcgaatgc agactttgca
241 gaatgtcagc atgcctacag agaatcaaga agaaaacctt tctatggaga aaagtcatca
301 ttttgaggat tccaagacac ttcattcagt ggaagaaaaa ttaagtggtg atagtgtgaa
361 cagtctccct caaagtgtaa atgttccatc ccagatacat tccgaggaca cattaactct
421 gagaacttca acagacaatt tatcttcaaa cataattata cacccttcag aaaattctga
481 catcttgaag aattataata acttttatcg ttttctacct actgcacctc caaatgtgat
541 gtctcaagct gatacagtaa ttctggataa atccaaaatt actgtgcctt ttctcaagca
601 tggattttgt gaaaatttag atgacatttg ccattctatc aaacaaatga aagaagagct
661 tcaaaagtca catgatgggg aagtggcact tacaaatgaa cttcagactt tacaaactga
721 tccagatgtt cacaggaatg gtaaatatga catgtcccct attcaccagg ataaaatgaa
781 ctttattaag gaagaaaact tggacggtaa cttaaatgaa gatataaaat caaagagaat
841 ttcagaatta gaggcattag tgaagaaatt actccccttc agggaaactg tgtcaaaatt
901 ccatgtgcat ttttgtagaa aatgtaaaaa gttatctaag agtgaaatgc acaggggaaa
961 gaaaaatgag aaaaacaata aagaaattcc catcactggc aaaaatatta cagatttaaa
1021 attccattcc agagttccaa gatacacact gtccttcctc gaccaaacaa aacatgaaat
1081 gaaagacaaa gaaagacaac catttctagt aaaacaagga tcaataatat ctgaaaatga
1141 gaaaacttcc aaagttaatt ccgttactga gcagtgtgtt gcaaaaattc agtacttaca
1201 gaattaccta aaagaatctg tgcagataca gaaaaaagta atggaactgg agagtgaaaa
1261 tctaaacctt aagtccaaaa tgaaacctct tatctttacc acacaatctc tcatacagaa
1321 agttgaaaca tatgaaaagc aacttaagaa tctggttgaa gaaaagagta ctattcagtc
1381 taagttaagt aaaacagaag aatacagcaa agagtgtctt aaagaattta aaaaaataat
1441 tagtaaatat aatgttctgc aaggccaaaa taaaactcta gaggaaaaaa atatacaact
1501 ttctttagag aagcaacaaa tgatggaagc attagatcaa ctaaaaagta aagaacacaa
1561 aactcaaagt gatatggcca ttgtaaataa tgaaaataat cgaatgagta tagaaatgga
1621 agcaatgaaa accaatattc tgttgataca agatgaaaaa gaaatgttag agaaaaaaac
1681 acaccagctt ctaaaagaaa aaagctcact tggaaatgaa ctaaaagaaa gccagctaga
1741 gataatccag ctaaaagaga aagaaagatt ggcaaaaacg gaacaagaga cacttcttca
1801 aataatagaa acagttaaag atgaaaaact caaccttgaa acaacattac aagaatctac
1861 tgctgccaga caaattatgg aaagagaaat tgagaatatt caaacctacc aatctactgc
1921 cgaagagaat tttctgcaag aaataaaaaa tgcaaaatca gaagcaagta tttataagaa
1981 tagcttgtca gaaattggca aggaatgtga aatgttatca aaaatggtaa tggaaaccaa
2041 aacagataat cagattctaa aagaagaact aaagaaacat agtcaagaaa atataaaatt
2101 tgaaaacagc atcagtagac ttactgaaga caaaatactt ttagaaaatt acgtaagaag
2161 catagaaaat gaaagggata ccttggaatt tgagatgcgg catcttcaac gagaatattt
2221 aagtttaagt gataaaattt gtaatcagca taatgaccct tcaaaaacaa cttatatttc
2281 aagaagagag aaattccatt ttgacaacta tactcacgaa gatacttcta gtcctcagag
2341 taggcctttg gcttcggatt tgaaaggtta tttcaaagtt aaagacagaa ctctcaagca
2401 tcattaggat tcctcaagat tgctaagaaa ctcccttcga gaaatagcca atgttaattg
2461 tactgctaac tgaactatgc atatctaact catctcaaat gactcataat gaggcgctat
2521 atatttgctt taaaaattat gcacagaatg gtttggtgca gataacttaa gctttctcag
2581 ctgggaattt cagaagatgg gggagaactt ctacaaggga gggcaggtac ctgtacatgg
2641 aaggagctga gatgtctaaa gtcacccaca tttgtcattt gaaaaagtat atataaataa
2701 aagatactat tttgaagaag caaaaaaaaa aaaaaaa
//