LOCUS BC038444 3996 bp mRNA linear HUM 10-JUL-2017
DEFINITION Homo sapiens adaptor-related protein complex 3, beta 1 subunit,
mRNA (cDNA clone MGC:40360 IMAGE:3914400), complete cds.
ACCESSION BC038444
VERSION BC038444.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3996)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3996)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-OCT-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
REFERENCE 3 (bases 1 to 3996)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2017) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK Sequence update by database staff to remove vector contamination
COMMENT On Jul 10, 2017 this sequence version replaced BC038444.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 64 Row: a Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32484978.
FEATURES Location/Qualifiers
source 1..3996
/db_xref="H-InvDB:HIT000052035"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40360 IMAGE:3914400"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3996
/gene="AP3B1"
/gene_synonym="ADTB3"
/gene_synonym="ADTB3A"
/gene_synonym="HPS"
/gene_synonym="HPS2"
/gene_synonym="PE"
/db_xref="GeneID:8546"
/db_xref="HGNC:HGNC:566"
/db_xref="MIM:603401"
CDS 113..3397
/gene="AP3B1"
/gene_synonym="ADTB3"
/gene_synonym="ADTB3A"
/gene_synonym="HPS"
/gene_synonym="HPS2"
/gene_synonym="PE"
/codon_start=1
/product="adaptor-related protein complex 3, beta 1
subunit"
/protein_id="AAH38444.1"
/db_xref="GeneID:8546"
/db_xref="HGNC:HGNC:566"
/db_xref="MIM:603401"
/translation="MSSNSFPYNEQSGGGEATELGQEATSTISPSGAFGLFSSDLKKN
EDLKQMLESNKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVYVYL
VRYAEEQQDLALLSISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASA
DLSPYVRKNAAHAIQKLYSLDPEQKEMLIEVIEKLLKDKSTLVAGSVVMAFEEVCPDR
IDLIHKNYRKLCNLLVDVEEWGQVVIIHMLTRYARTQFVSPWKEGDELEDNGKNFYES
DDDQKEKTDKKKKPYTMDPDHRLLIRNTKPLLQSRNAAVVMAVAQLYWHISPKSEAGI
ISKSLVRLLRSNREVQYIVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTMIKTLKLEI
LTNLANEANISTLLREFQTYVKSQDKQFAAATIQTIGRCATNILEVTDTCLNGLVCLL
SNRDEIVVAESVVVIKKLLQMQPAQHGEIIKHMAKLLDSITVPVARASILWLIGENCE
RVPKIAPDVLRKMAKSFTSEDDLVKLQILNLGAKLYLTNSKQTKLLTQYILNLGKYDQ
NYDIRDRTRFIRQLIVPNEKSGALSKYAKKIFLAQKPAPLLESPFKDRDHFQLGTLSH
TLNIKATGYLELSNWPEVAPDPSVRNVEVIELAKEWTPAGKAKQENSAKKFYSESEEE
EDSSDSSSDSESESGSESGEQGESGEEGDSNEDSSEDSSSEQDSESGRESGLENKRTA
KRNSKAKGKSDSEDGEKENEKSKTSDSSNDESSSIEDSSSDSESESEPESESESRRVT
KEKEKKTKQDRTPLTKDVSLLDLDDFNPVSTPVALPTPALSPSLMADLEGLHLSTSSS
VISVSTPAFVPTKTHVLLHRMSGKGLAAHYFFPRQPCIFGDKMVSIQITLNNTTDRKI
ENIHIGEKKLPIGMKMHVFNPIDSLEPEGSITVSMGIDFCDSTQTASFQLCTKDDCFN
VNIQPPVGELLLPVAMSEKDFKKEQGVLTGMNETSAVIIAAPQNFTPSVIFQKVVNVA
NVGAVPSGQDNIHRFAAKTVHSGSLMLVTVELKEGSTAQLIINTEKTVIGSVLLRELK
PVLSQG"
BASE COUNT 1276 a 782 c 861 g 1077 t
ORIGIN
1 cctgcgcgcg ctcctccgta cgagaactag ttttgttccg tgccctctgg actggaacct
61 tttggagaga acccccggca ggaccaaccc cgcacccgcc agcaccgcgg caatgtccag
121 caatagtttt ccttacaatg agcagtccgg aggaggggag gcgacggagc tgggtcagga
181 ggcgacctca accatttccc cctcgggggc cttcggcctc tttagcagcg atttgaagaa
241 gaatgaagat ctaaagcaaa tgttagagag caacaaagat tctgctaaac tggatgctat
301 gaagcggatt gttgggatga ttgcaaaagg gaaaaatgca tctgaactgt ttcctgctgt
361 tgtgaagaat gtggccagta aaaatattga gatcaagaag ttggtatatg tttacctggt
421 tcgatatgct gaagaacagc aggatcttgc actcctgtcc ataagcactt ttcagcgagc
481 tctgaaggac ccaaaccaac taattcgtgc aagcgctttg agagttctgt caagtattag
541 agtgccaatt attgtaccta tcatgatgct tgctattaag gaagcttctg ctgacttatc
601 accatatgtt aggaagaatg cagcccatgc aatacaaaaa ttatacagcc ttgatccaga
661 gcagaaggaa atgttaattg aagtaattga aaaacttctg aaagataaaa gcacattggt
721 agctggcagt gttgtgatgg cttttgaaga agtatgcccg gacagaatag atctgattca
781 taaaaattac cgcaagctat gtaacttact agtggatgtt gaagagtggg ggcaggttgt
841 cataatccac atgctaactc gatatgctcg gacacagttt gtcagccctt ggaaagaggg
901 tgatgaatta gaagacaatg gaaagaattt ctacgaatct gatgatgatc agaaggaaaa
961 gactgacaaa aagaagaagc cgtatactat ggatccagat catagactct taattagaaa
1021 tacaaagcct ttgcttcaga gcaggaatgc tgcggtggtt atggcagttg ctcagctgta
1081 ttggcacata tcaccaaaat ctgaagctgg cataatttct aaatcactag tgcgtttact
1141 tcgtagcaat agggaggtgc agtatattgt cctacaaaat atagcaacta tgtcaattca
1201 aagaaagggg atgtttgaac cttatctgaa gagtttctat gttaggtcaa ctgatccaac
1261 tatgatcaag acactgaagc ttgaaatttt gacaaacttg gcaaatgaag ccaacatatc
1321 aactcttctt cgagaatttc agacctatgt gaaaagccag gataaacaat ttgcagcagc
1381 cactattcag actataggca gatgtgcaac caacatcttg gaagtcactg acacgtgcct
1441 caatggcttg gtctgtctgc tgtccaacag ggatgaaata gttgttgctg aaagtgtggt
1501 tgttataaag aaattactgc aaatgcaacc tgcacaacat ggtgaaatta ttaaacatat
1561 ggccaaactc ctggacagta tcactgttcc tgttgctaga gcaagtattc tttggctaat
1621 tggagaaaac tgtgaacgag ttcctaaaat tgcccctgat gttttgagga agatggctaa
1681 aagcttcact agtgaagatg atctggtaaa actgcagata ttaaatctgg gagcaaaatt
1741 gtatttaacc aactccaaac agacaaaatt gcttacccag tacatattaa atctcggcaa
1801 gtatgatcaa aactacgaca tcagagaccg tacaagattt attaggcagc ttattgttcc
1861 gaatgaaaag agtggagctt taagtaaata tgccaaaaaa atattcctag cacaaaagcc
1921 tgcaccactg cttgagtctc cttttaaaga tagagatcat ttccagcttg gcaccttatc
1981 tcatactctc aacattaaag ctactgggta cctggaatta tctaattggc cagaggtggc
2041 gcccgaccca tcagttcgaa atgtagaagt aatagagttg gcaaaagaat ggaccccagc
2101 aggaaaagca aagcaagaga attctgctaa gaagttttat tctgaatctg aggaagagga
2161 ggactcttct gatagtagca gtgacagtga gagtgaatct ggaagtgaaa gtggagaaca
2221 aggcgaaagt ggggaggaag gagacagcaa tgaggacagc agtgaggact cctccagtga
2281 gcaggacagt gagagtggac gggagtcagg cctagaaaac aaaagaacag ccaagaggaa
2341 ctcaaaagcc aaaggaaaaa gtgattctga agatggggag aaggaaaatg aaaaatctaa
2401 aacttcagat tcttcaaatg acgaatctag ttcaatagaa gacagttctt ccgattctga
2461 atcagagtca gaacctgaaa gtgaatctga atccagaaga gtcactaagg agaaagaaaa
2521 gaaaacaaag caagatagaa ctcctcttac caaagatgtt tcacttctag atctggatga
2581 ttttaaccca gtatccactc cagttgcact tcccacacca gctctttctc caagtttgat
2641 ggctgatctt gaaggtttac acttgtcaac ttcctcttca gtcatcagtg tcagtactcc
2701 tgcatttgta ccaacgaaaa ctcacgtgct gcttcatcga atgagtggaa aaggactagc
2761 tgcccattat ttctttccaa gacagccttg catttttggt gataagatgg tctctataca
2821 aataacactg aataacacta ctgatcgaaa gatagaaaat atccacatag gggaaaaaaa
2881 acttcctata ggcatgaaaa tgcatgtttt taatccaata gactctcttg agcctgaggg
2941 atccattaca gtttcaatgg gtattgactt ttgtgattct actcagactg ccagtttcca
3001 gttgtgtacc aaggatgatt gcttcaatgt taatattcag ccacctgttg gagaactgct
3061 tttacctgtg gccatgtcag agaaagattt taagaaagag caaggagtgc taacaggaat
3121 gaatgaaact tctgctgtaa tcattgctgc accacagaat ttcactccct ctgtgatctt
3181 tcagaaggtt gtaaatgtag ccaatgtagg tgcagtccct tctggccagg ataatataca
3241 caggtttgca gctaaaactg tgcacagtgg gtcattgatg ctagtcacag tggaactgaa
3301 ggaaggctct acagcccagc ttatcataaa cactgagaaa actgtgattg gctctgttct
3361 gctgcgggaa ctgaagcctg tcctgtctca ggggtaacct gcttacatct ggactttaga
3421 atctggcaca caacaaaagt gcctggcatc cactactgct gcctttcatt tataataata
3481 gcccttccat ctggcagtgg gggtagaata cactcttgac attcttgtct cctgctttag
3541 aatgctagtg tgtatctatc atgtatgcaa tactttcccc ctttttgctt tgctaaccaa
3601 agagcatata ttttactgtc agttgtctca actcttgaat ccatgtggcg ttttctctgt
3661 cctgctgctt cttttggcct cctcgttttc cttctctttt tcgacaatgg tagacatgaa
3721 tgagatattt aaagttcatt ggaaatcttc ttccctacag cagtaagcaa aaattagcaa
3781 agagatagtc taaatggcct ctcagcttgg tatgtgaaaa tgagatcaca tactttttaa
3841 atccaaatac aaaagcatag tctctgcaag attttgttct ttgaatttct tgatattgta
3901 attgattatt gataactgtc atcatgaaat tatctctcaa taataagata aataaactag
3961 catatgaatc ataaaaaaaa aaaaaaaaaa aaaaaa
//