LOCUS BC038433 3420 bp mRNA linear HUM 07-OCT-2003
DEFINITION Homo sapiens opiate receptor-like 1, mRNA (cDNA clone MGC:34578
IMAGE:5164017), complete cds.
ACCESSION BC038433
VERSION BC038433.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3420)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3420)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: j Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4505512.
FEATURES Location/Qualifiers
source 1..3420
/db_xref="H-InvDB:HIT000052033"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34578 IMAGE:5164017"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3420
/gene="OPRL1"
/gene_synonym="KOR-3"
/gene_synonym="MGC34578"
/gene_synonym="NOCIR"
/gene_synonym="OOR"
/gene_synonym="ORL1"
/db_xref="GeneID:4987"
/db_xref="MIM:602548"
CDS 413..1525
/gene="OPRL1"
/gene_synonym="KOR-3"
/gene_synonym="MGC34578"
/gene_synonym="NOCIR"
/gene_synonym="OOR"
/gene_synonym="ORL1"
/codon_start=1
/product="OPRL1 protein"
/protein_id="AAH38433.1"
/db_xref="GeneID:4987"
/db_xref="MIM:602548"
/translation="MEPLFPAPFWEVIYGSHLQGNLSLLSPNHSLLPPHLLLNASHGA
FLPLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLL
TLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALD
VRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEIECLVEIPTPQDYWGPVFAIC
IFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRNLRRITRLVLVVVAVFVGCW
TPVQVFVLAQGLGVQPSSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFRKFC
CASALRRDVQVSDRVRSIAKDVALACKTSETVPRPA"
misc_feature 614..1369
/gene="OPRL1"
/gene_synonym="KOR-3"
/gene_synonym="MGC34578"
/gene_synonym="NOCIR"
/gene_synonym="OOR"
/gene_synonym="ORL1"
/note="7tm_1; Region: 7 transmembrane receptor (rhodopsin
family)"
/db_xref="CDD:pfam00001"
BASE COUNT 638 a 1017 c 1019 g 746 t
ORIGIN
1 cgaccaggtg gggcgggtcg tggcgggggg cagggtcccc tccggagggc cctgggttag
61 agtctgggcg tggacgcgcc cctcataggg gtcattgggg catagaggca tagagccggc
121 ttctccagct tgggattcac gtgtttttca agggctaacg gaaatgctga gatctaaaag
181 catgtttatt gctgccaagg cctgatgatg aaacttcaag tcaaattact tcgggctgcc
241 ggctcactcg gctgctgcgt ctggtctggc gtctgctgag aagatcctct tctaccctgc
301 tctgcacctg tgctcgactg ccagccggct gagggcgggg gtctccacgg tggtcccagc
361 tcccaaggag gttgcagaag taccgtacag agtggatttg cagggcagtg gcatggagcc
421 cctcttcccc gcgccgttct gggaggttat ctacggcagc caccttcagg gcaacctgtc
481 cctcctgagc cccaaccaca gtctgctgcc cccgcatctg ctgctcaatg ccagccacgg
541 cgccttcctg cccctcgggc tcaaggtcac catcgtgggg ctctacctgg ccgtgtgtgt
601 cggagggctc ctggggaact gccttgtcat gtacgtcatc ctcaggcaca ccaaaatgaa
661 gacagccacc aatatttaca tctttaacct ggccctggcc gacactctgg tcctgctgac
721 gctgcccttc cagggcacgg acatcctcct gggcttctgg ccgtttggga atgcgctgtg
781 caagacagtc attgccattg actactacaa catgttcacc agcaccttca ccctaactgc
841 catgagtgtg gatcgctatg tagccatctg ccaccccatc cgtgccctcg acgtccgcac
901 gtccagcaaa gcccaggctg tcaatgtggc catctgggcc ctggcctctg ttgtcggtgt
961 tcccgttgcc atcatgggct cggcacaggt cgaggatgaa gagatcgagt gcctggtgga
1021 gatccctacc cctcaggatt actggggccc ggtgtttgcc atctgcatct tcctcttctc
1081 cttcatcgtc cccgtgctcg tcatctctgt ctgctacagc ctcatgatcc ggcggctccg
1141 tggagtccgc ctgctctcgg gctcccgaga gaaggaccgg aacctgcggc gcatcactcg
1201 gctggtgctg gtggtagtgg ctgtgttcgt gggctgctgg acgcctgtcc aggtcttcgt
1261 gctggcccaa gggctggggg ttcagccgag cagcgagact gccgtggcca ttctgcgctt
1321 ctgcacggcc ctgggctacg tcaacagctg cctcaacccc atcctctacg ccttcctgga
1381 tgagaacttc aaggcctgct tccgcaagtt ctgctgtgca tctgccctgc gccgggacgt
1441 gcaggtgtct gaccgcgtgc gcagcattgc caaggacgtg gccctggcct gcaagacctc
1501 tgagacggta ccgcggcccg catgactagg cgtggacctg cccatggtgc ctgtcagccc
1561 gcagagccca tctacgccca acacagagct cacacaggtc actgctctct aggcggacac
1621 accctgggcc ctgagcatcc agagcctggg atgggctttt ccctgtgggc cagggatgct
1681 cggtcccaga ggaggaccta gtgacatcat gggacaggtc aaagcattag ggccacctcc
1741 atggccccag acagactaaa gctgccctcc tggtgcaggg ccgaggggac acaaggacct
1801 acctggaagc agctgacatg ctggtggacg gccgtgactg gagcccgtgc ccctccctcc
1861 ccgtgcttca tgtgactctt ggcctctctg ctgctgcgtt ggcagaaccc tgggtgggca
1921 ggcacccgga ggaggagcag cagctgtgtc atcctgtgcc ccccatgtgc tgtgtgctgt
1981 ttgcatggca gggctccagc tgccttcagc cctgtgacgt ctcctcaggg cagctggaca
2041 ggcttggcac ggcccgggaa gtgcagcagg cagcttttct ttggggtggg acttgccctg
2101 agcttggagc tgccacctgg aggacttgcc tgttccgact ccacctgtgc agccggggcc
2161 accccaggag aaagtgtcca ggtgggggct ggcagtccct ggctgcagac cccgagctgg
2221 ccctgggcca gccgcacctc tgaaggtttt ctgtgtgctg cacggtgcag gcctcatccc
2281 tgactgcagc ttgactctgg gcccaacccc catttccctt caggagacca gcgagaggcc
2341 ctggcccatt ccctccagcg gtgcaatgaa ctatcatgct gtggaccgtc aacccagccc
2401 tgcttctcag tgtggggcag gtgtctcagg acgaaggcgc cgcgtgacca catgggcagc
2461 tctgttcaca aagtggaggc ctcgttttcc tggtcttgac tgctctgttt gggtgggaga
2521 agattctctg ggggtcccca catcctccca aggctcccct cacagcctct cctttgcttg
2581 aagccagagg tcagtggccg tgctgtgttg cgggggaagc tgtgtggaag gagaagctgg
2641 tggccacagc agagtcctgc tctggggacg cctgcttcat ttacaagcct caagatggct
2701 ctgtgtaggg cctgagcttg ctgcccaacg ggaggatggc ttcacagcag agccagcatg
2761 aggggtgggg cctggcaggg cttgcttgag ccaaactgca aaggctgtgg tggctgtgag
2821 gacactgcgg gggttggggg gggggcgtct gtacctcagg ggatgccccg ctgtggtcac
2881 ccagagaatc acccttcctg gtctacagat ggaagctgca ggttggtgac tttgcaaata
2941 cacttcctac agatgaacta ttaaaagacc tgcaacattg aaaaaactca ttttttccac
3001 caaaaccttg gccaggtaac ctaccttagg cacctgcaaa gaacaggaag tgatggctgt
3061 ctcgcaacag agcctgggct gctcctcctg ctctggggag tctaggccgt ggggactgtt
3121 ctggggaggc tcatgctgtc tccatgacgt ctgtggcagg agtccctgag gacgggagct
3181 gcctagctac agttttcttg ccaaggcgag gtgttttgtg aatctgtgct gatgtaatgt
3241 gcaccttcac gtatttatgc atgtggcaag cgttacttcc tgtgcacgta gccagccctg
3301 ggtctgtctc tggggtaatg aaaaaggacc ctaataaaca cctgctcact ggctgggtat
3361 tcttcgtaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//