LOCUS BC038406 3375 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens chromosome 3 open reading frame 20, mRNA (cDNA clone MGC:35115 IMAGE:5167835), complete cds. ACCESSION BC038406 VERSION BC038406.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3375) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3375) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-OCT-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 51 Row: a Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 68163571. FEATURES Location/Qualifiers source 1..3375 /db_xref="H-InvDB:HIT000052026" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:35115 IMAGE:5167835" /tissue_type="Brain, adult medulla" /clone_lib="NIH_MGC_119" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3375 /gene="C3orf20" /gene_synonym="DKFZP434N1817" /db_xref="GeneID:84077" /db_xref="HGNC:HGNC:25320" CDS 373..3087 /gene="C3orf20" /gene_synonym="DKFZP434N1817" /codon_start=1 /product="chromosome 3 open reading frame 20" /protein_id="AAH38406.2" /db_xref="GeneID:84077" /db_xref="HGNC:HGNC:25320" /translation="MSYIKSNLELYQQYTAMAPKLLARISKLLMICQNAGISVPKGIR NIFEFTWEELISDPSVPTPSDILGLEVSFGAPLVVLMEPTFVQVPTLKKPLPPPPPAP PRPVLLATTGAAKRSTLSPTMARQVRTHQETLNRFQQQSIHLLTELLRLKMKAMVESM SVGANPLDITRRFVEASQLLHLNAKEMAFNCLISTAGRSGYSSGQLWKESLANMSAIG VNSPYQLIYHSSTACLSFSLSAGKEAKKKIGKSRTTEDVSMPPLHRGVGTPANSLEFS DPCPEAREKLQELCRHIEAERATWKGRNISYPMILRNYKAKMPSHLMLARKGDSQTPG LHYPPTAGAQTLSPTSHPSSANHHFSQHCQEGKAPKKAFKFHYTFYDGSSFVYYPSGN VAVCQIPTCCRGRTITCLFNDIPGFSLLALFNTEGQGCVHYNLKTSCPYVLILDEEGG TTNDQQGYVVHKWSWTSRTETLLSLEYKVNEEMKLKVLGQDSITVTFTSLNETVTLTV SANNCPHGMAYDKRLNRRISNMDDKVYKMSRALAEIKKRFQKTVTQFINSILLAAGLF TIEYPTKKEEEEFVRFKMRSRTHPERLPKLSLYSGESLLRSQSGHLESSIAETLKDEP ESAPVSPVRKTTKIHTKAKVTSRGKAREGRSPTRWAALPSDCPLVLRKLMLKEDTRAG CKCLVKAPLVSDVELERFLLAPRDPSQVLVFGIISSQNYTSTGQLQWLLNTLYNHQQR GRGSPCIQCRYDSYRLLQYDLDSPLQEDPPLMVKKNSVVQGMILMFAGGKLIFGGRVL NGYGLSKQNLLKQIFRSQQDYKMGYFLPDDYKFSVPNSVLSLEDSESVKKAESEDIQG SSSSLALEDYVEKELSLEAEKTREPEVELHPLSRDSKITSWKKQASKK" BASE COUNT 944 a 937 c 801 g 693 t ORIGIN 1 gtccttttaa gtcagtaaat tgaactaagt cggttattcg gcaagcagtt cctataaaaa 61 actacatggc taagatgtac acgttggata attccatgcc catcttggca ttgcgaccag 121 gagcttctgc atcccttgct tccaaagaga accagtgaaa catcttttta ttcttgcagg 181 ttcttaatga ttgaccacaa gcagatcttt caccctcgga tctctagcta caaaaggaac 241 cactggctca atgacctgta agggccgttt cagcacatcc attctgtcca tctccaagcc 301 ttcaccgtag ggaagaactt ttgctctcag tcacctctca gagagctctc tttatagctg 361 aaggtccctc tcatgagtta catcaagagt aacctagaat tatatcagca atacacagcc 421 atggccccca agctactggc ccgcatctcc aaactcctca tgatctgcca gaatgcaggc 481 atttctgtac caaaaggcat cagaaacatc tttgagttca cttgggaaga gctcatcagt 541 gacccttcag tgcctacccc gtccgacatc ttgggcctgg aggtcagctt tggagccccc 601 ctggtggtgc tcatggaacc cacctttgtg caggtcccca cactgaagaa gccactacct 661 ccaccaccac cagcaccacc acgtccagtg ctgctggcaa ccactggggc agccaagcgc 721 tccaccctct ctcccaccat ggcccgtcag gtgcgcaccc accaggagac cctgaacagg 781 tttcagcagc agtccatcca cctgctgacg gagctcctca gactgaagat gaaggccatg 841 gtggagtcta tgtcggtggg tgccaacccc ttggacatca ccaggcgctt tgtggaggcc 901 agccagctcc tccacctcaa tgccaaggag atggccttca actgcctgat cagcacagcc 961 gggagaagtg gctacagcag cggacagttg tggaaagagt ccctcgcaaa catgtccgcc 1021 attggggtga actcgcctta ccagctgatc taccactctt ccacagcctg tctgagcttt 1081 tctctctctg ctggaaaaga agccaagaag aaaataggca aatctagaac tacagaagat 1141 gtcagcatgc cgcccctgca tcgaggagtg ggaacccctg ccaacagcct ggagttcagc 1201 gacccctgcc ctgaggcccg ggagaagctg caggagttgt gtcgccacat agaagctgaa 1261 agggccacat ggaaagggag gaatatctcc taccccatga tcttacgaaa ctacaaggca 1321 aagatgccct ctcatctaat gttggcccgc aaaggagact ctcagacccc gggtttacat 1381 taccctccca ctgcaggtgc tcagactctc agccccacct ctcacccatc ttctgccaac 1441 catcatttca gtcagcattg tcaagagggg aaggcaccca agaaggcctt caagtttcat 1501 tacaccttct atgatggctc ctccttcgtt tactatccct ctggaaacgt cgctgtatgt 1561 cagatcccca catgctgcag agggagaacc atcacctgcc tctttaatga catacctgga 1621 ttctccttgc tggccctatt caatactgaa ggccagggct gtgttcacta caacctaaaa 1681 accagttgcc catatgtctt aatcttggat gaggaaggtg ggaccaccaa tgaccagcag 1741 ggctatgtag tccacaagtg gagctggact tccaggacag agaccctgct ttccctggaa 1801 tacaaggtga atgaggaaat gaaactaaag gtactgggac aggactccat cacagtcacc 1861 ttcacctccc tgaatgagac agtaacactc actgtgtcgg ccaacaattg tccccatgga 1921 atggcatatg acaaacggct gaaccgcaga atcagcaaca tggacgacaa ggtgtataag 1981 atgagccgag ccctggctga gatcaagaag cggtttcaga agacagtgac tcagttcatt 2041 aattctatct tgctggccgc aggtctgttt accattgaat atcccaccaa aaaggaggag 2101 gaagaatttg ttcggttcaa gatgagatcc agaactcatc ccgagcggct ccccaagcta 2161 agtttatact caggagaaag tcttttacga tctcagtcag gccacctgga atcctcaatt 2221 gcagagactt tgaaggatga gcctgagtct gctcctgtga gcccagttcg gaagaccacc 2281 aaaatccaca ccaaagccaa ggtcacatcc agagggaagg cccgcgaggg gcgcagcccc 2341 accaggtggg cggccttgcc ctcagactgc ccgctggtgc tgcggaagct catgctcaag 2401 gaagacaccc gtgctggctg caagtgcctg gtgaaggcgc ccctggtctc tgacgtggag 2461 ctggagcgct tcctgttggc gccccgagac cccagccaag tgctggtgtt tgggatcatc 2521 tcaagccaga actacaccag cactgggcag ctccagtggc tgctgaacac tctctacaac 2581 caccagcagc ggggccgtgg ctccccctgc atccagtgcc ggtatgactc ctaccgcctg 2641 ctgcagtatg acctggacag ccccctgcag gaggaccctc ccctgatggt gaagaagaac 2701 tctgtggtgc aggggatgat tctgatgttt gccgggggga agctcatttt tgggggccgt 2761 gttttgaatg gatatggcct cagcaagcag aatctgctga aacagatctt ccggtctcaa 2821 caggattaca agatgggcta cttcctgccg gatgactaca aattcagtgt tcccaactct 2881 gtcctgagcc tggaggattc tgaatcagtc aagaaagccg agtcagaaga tatccaagga 2941 agcagctcct cattggccct ggaagactat gtggagaagg agttatctct ggaggctgag 3001 aagacaagag agcctgaagt ggagctacat cctctcagca gggacagcaa gataactagt 3061 tggaagaagc aggcctccaa gaagtagcgc catcctggca gcagccaagt gagccaggcc 3121 ccggcccggg gtgctggggc ttcttgccag cccagccctg cctccccggt ctcccaccct 3181 gtcctccaag cttctataat aaaccagcgg gcctccagca ttggggtgag gctctgggga 3241 aggacagaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3301 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3361 aaaaaaaaaa aaaaa //