LOCUS BC038402 2247 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ARP5 actin-related protein 5 homolog (yeast), mRNA
(cDNA clone MGC:34153 IMAGE:5198236), complete cds.
ACCESSION BC038402
VERSION BC038402.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2247)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2247)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: p Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31542679.
FEATURES Location/Qualifiers
source 1..2247
/db_xref="H-InvDB:HIT000052025"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34153 IMAGE:5198236"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2247
/gene="ACTR5"
/gene_synonym="FLJ12785"
/db_xref="GeneID:79913"
/db_xref="HGNC:HGNC:14671"
CDS 26..1849
/gene="ACTR5"
/gene_synonym="FLJ12785"
/codon_start=1
/product="ARP5 actin-related protein 5 homolog (yeast)"
/protein_id="AAH38402.1"
/db_xref="GeneID:79913"
/db_xref="HGNC:HGNC:14671"
/translation="MAANVFPFRDARAAPDPVLEAGPVAHGPLPVPLVLDNGSFQVRA
GWACPGQDPGPEPRLQFRAVCARGRGGARGASGPQVGNALGSLEPLRWMLRSPFDRNV
PVNLELQELLLDYSFQHLGVSSQGCVDHPIVLTEAVCNPLYSRQMMSELLFECYGIPK
VAYGIDSLFSFYHNKPKNSMCSGLIISSGYQCTHVLPILEGRLDAKNCKRINLGGSQA
AGYLQRLLQLKYPGHLAAITLSRMEEILHEHSYIAEDYVEELHKWRCPDYYENNVHKM
QLPFSSKLLGSTLTSEEKQERLQQQLRRLQELNARRREEKLQLDQERLDRLLYVQELL
EDGQMDQFHKALIELNMDSPEELQSYIQKLSIAVEQAKQKILQAEVNLEVDVVDSKPE
TPDLEQLEPSLEDVESMNDFDPLFSEETPGVEKPVTTVQPVFNLAAYHQLFVGTERIR
APEIIFQPSLIGEEQAGIAETLQYILDRYPKDVQEMLVQNVFLTGGNTMYPGMKARME
KELLEMRPFRSSFQVQLASNPVLDAWYGARDWALNHLDDNEVWITRKEYEEKGGEYLK
EHCASNIYVPIRLPKQASRSSDAQASSKGSAAGGGGAGEQA"
BASE COUNT 550 a 570 c 636 g 491 t
ORIGIN
1 ggcggggctg gacgcgcgct ccaagatggc ggcgaacgtg tttccgttcc gcgacgcccg
61 tgccgcaccg gacccagtgc tggaggccgg cccggtggca cacgggccac tgccggtacc
121 gctggtgctg gacaacgggt cgttccaagt ccgcgctggc tgggcgtgtc ccgggcagga
181 cccaggtccc gagccgcgcc tgcagttccg cgcggtgtgc gcccgcggtc gtggcggggc
241 acggggcgcg tcgggcccgc aggtggggaa cgctctgggc agcctggagc cactgcgctg
301 gatgctgcgc tcgcccttcg accgcaacgt gccggtcaac ctggagcttc aggagttgct
361 gctggactac agcttccagc acctgggtgt ctcctcacag ggctgtgttg atcatcccat
421 agttttgaca gaagctgtgt gcaacccact gtattcacgg caaatgatgt ctgagcttct
481 ttttgagtgc tacgggattc ccaaggttgc ctatggaata gacagcctct tcagcttcta
541 ccacaataag ccaaagaact cgatgtgcag tgggctaatc atttcatctg gataccagtg
601 tacgcatgtt ttacccatct tagaagggag attagatgct aaaaactgca agcgcatcaa
661 tcttggagga agccaagcag ctggttacct ccagcgtctc ctccagctga agtaccctgg
721 gcacctggca gccatcaccc tcagccgcat ggaggagatt ctgcatgagc acagctacat
781 cgctgaggat tatgtggaag aattacacaa atggcggtgt cctgattatt atgagaataa
841 cgtccacaag atgcagctcc cattttccag caagctcctg ggcagcactc tgacctctga
901 ggagaaacaa gaaaggctgc agcagcaatt gcggcggctg caggagctca atgcccggcg
961 gcgggaggag aagctgcagc tggatcagga gcgtctggac cgactgctat atgtgcagga
1021 acttctagag gatggccaga tggatcagtt tcacaaagct ctgatagagc tgaatatgga
1081 ctccccagaa gagctgcagt cctacatcca gaagctcagt atagcagtgg agcaggctaa
1141 gcagaaaatc ctccaagcgg aagtcaacct cgaggtggat gtggtagaca gcaagccaga
1201 gacccctgac ctggagcagc tggagccgtc tttggaagat gtggaaagca tgaatgattt
1261 tgatcccttg ttttcagagg aaacacctgg agtggagaag ccggtcacca ctgttcagcc
1321 cgtgtttaac ttggcagcat atcatcagct atttgttggg acagaaagaa ttcgagctcc
1381 agagattatt ttccagccat ctctcatagg agaagaacag gctgggattg cagagactct
1441 ccagtacatt ctggacaggt acccaaagga cgttcaggaa atgctggttc agaacgtttt
1501 cctcactggc ggcaacacaa tgtatcctgg catgaaagcc agaatggaga aggaactgtt
1561 ggagatgaga cccttccggt cttcttttca ggttcaactt gcctcgaacc ctgtgctgga
1621 tgcctggtac ggtgctcgtg actgggcctt gaaccaccta gatgataatg aagtttggat
1681 caccaggaaa gagtatgaag aaaagggagg agagtacctc aaggagcact gtgcttccaa
1741 catctatgtc cccatccgcc tgccgaagca ggcctcccgc tcctcagatg cccaggcatc
1801 cagcaagggc tccgctgctg gtggaggtgg tgctggtgag caggcatagc agaggccctc
1861 cagagagact gccctgcacg ccatgccttg ggccacgttg gcagtgtgac aggactgtga
1921 ttgtgctaga tgtacctgcc caagtctgct ggtcacattt ggcagcaaaa tggatttctc
1981 ctggggagaa caaagttaag ggacactgag acctgccctt cagaattcgg ttcacttggg
2041 ggcttctgtg gtagagacta actggccttc tgatgtcttt gttcaactgt ggccagctgt
2101 ggcatcagct tcctggagca gtaaatgaag acagagtgga ggacacaaat gtacaaaatg
2161 cacaagactg atttcttacc acattttagt ctttcttgtt ttaaaaaaaa ttctttaaaa
2221 tttaaaaaaa aaaaaaaaaa aaaaaaa
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