LOCUS BC038384 1521 bp mRNA linear HUM 23-JUN-2006
DEFINITION Homo sapiens Y box binding protein 1, mRNA (cDNA clone MGC:5173
IMAGE:3449398), complete cds.
ACCESSION BC038384
VERSION BC038384.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1521)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1521)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: j Column: 8.
FEATURES Location/Qualifiers
source 1..1521
/db_xref="H-InvDB:HIT000052023"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5173 IMAGE:3449398"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1521
/gene="YBX1"
/gene_synonym="BP-8"
/gene_synonym="CSDA2"
/gene_synonym="CSDB"
/gene_synonym="DBPB"
/gene_synonym="MDR-NF1"
/gene_synonym="NSEP-1"
/gene_synonym="YB-1"
/gene_synonym="YB1"
/db_xref="GeneID:4904"
/db_xref="HGNC:HGNC:8014"
/db_xref="MIM:154030"
CDS 121..1095
/gene="YBX1"
/gene_synonym="BP-8"
/gene_synonym="CSDA2"
/gene_synonym="CSDB"
/gene_synonym="DBPB"
/gene_synonym="MDR-NF1"
/gene_synonym="NSEP-1"
/gene_synonym="YB-1"
/gene_synonym="YB1"
/codon_start=1
/product="Y box binding protein 1"
/protein_id="AAH38384.1"
/db_xref="GeneID:4904"
/db_xref="HGNC:HGNC:8014"
/db_xref="MIM:154030"
/translation="MSSEAETQQPPAAPPAAPALSAADTKPGTTGSGAGSGGPGGLTS
AAPAGGDKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRS
VGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQ
NYQNSESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVM
EGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEEDKENQGDETQGQQP
PQRRYRRNFNYRRRRPENPKPQDGKETKAADPPAENSSAPEAEQGGAE"
BASE COUNT 464 a 381 c 385 g 291 t
ORIGIN
1 gcggagagcg gaccccagag agccctgagc agccccaccg ccgccgccgg cctagttacc
61 atcacacccc gggaggagcc gcagctgccg cagccggccc cagtcaccat caccgcaacc
121 atgagcagcg aggccgagac ccagcagccg cccgccgccc cccccgccgc ccccgccctc
181 agcgccgccg acaccaagcc cggcactacg ggcagcggcg cagggagcgg tggcccgggc
241 ggcctcacat cggcggcgcc tgccggcggg gacaagaagg tcatcgcaac gaaggttttg
301 ggaacagtaa aatggttcaa tgtaaggaac ggatatggtt tcatcaacag gaatgacacc
361 aaggaagatg tatttgtaca ccagactgcc ataaagaaga ataaccccag gaagtacctt
421 cgcagtgtag gagatggaga gactgtggag tttgatgttg ttgaaggaga aaagggtgcg
481 gaggcagcaa atgttacagg tcctggtggt gttccagttc aaggcagtaa atatgcagca
541 gaccgtaacc attatagacg ctatccacgt cgtaggggtc ctccacgcaa ttaccagcaa
601 aattaccaga atagtgagag tggggaaaag aacgagggat cggagagtgc tcccgaaggc
661 caggcccaac aacgccggcc ctaccgcagg cgaaggttcc caccttacta catgcggaga
721 ccctatgggc gtcgaccaca gtattccaac cctcctgtgc agggagaagt gatggagggt
781 gctgacaacc agggtgcagg agaacaaggt agaccagtga ggcagaatat gtatcgggga
841 tatagaccac gattccgcag gggccctcct cgccaaagac agcctagaga ggacggcaat
901 gaagaagata aagaaaatca aggagatgag acccaaggtc agcagccacc tcaacgtcgg
961 taccgccgca acttcaatta ccgacgcaga cgcccagaaa accctaaacc acaagatggc
1021 aaagagacaa aagcagccga tccaccagct gagaattcgt ccgctcccga ggctgagcag
1081 ggcggggctg agtaaatgcc ggcttaccat ctctaccatc atccggttta gtcatccaac
1141 aagaagaaat atgaaattcc agcaataaga aatgaacaaa agattggagc tgaagaccta
1201 aagtgcttgc tttttgcccg ttgaccagat aaatagaact atctgcatta tctatgcagc
1261 atggggtttt tattattttt acctaaagac gtctcttttt ggtaataaca aacgtgtttt
1321 ttaaaaaagc ctggtttttc tcaatacgcc tttaaaggtt tttaaattgt ttcatatctg
1381 gtcaagttga gatttttaag aacttcattt ttaatttgta ataaaagttt acaacttgat
1441 tttttcaaaa aagtcaacaa actgcaagca cctgttaata aaggtcttaa ataattaaaa
1501 aaaaaaaaaa aaaaaaaaaa a
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