LOCUS BC038237 4042 bp mRNA linear HUM 06-JUN-2006 DEFINITION Homo sapiens integrin, alpha X (complement component 3 receptor 4 subunit), mRNA (cDNA clone MGC:46124 IMAGE:5745308), complete cds. ACCESSION BC038237 VERSION BC038237.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4042) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4042) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-SEP-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 79 Row: l Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34452172. FEATURES Location/Qualifiers source 1..4042 /db_xref="H-InvDB:HIT000052009" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:46124 IMAGE:5745308" /tissue_type="Blood, adult leukocytes" /clone_lib="NIH_MGC_118" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..4042 /gene="ITGAX" /db_xref="GeneID:3687" /db_xref="HGNC:HGNC:6152" /db_xref="MIM:151510" CDS 34..3543 /gene="ITGAX" /codon_start=1 /product="ITGAX protein" /protein_id="AAH38237.1" /db_xref="GeneID:3687" /db_xref="HGNC:HGNC:6152" /db_xref="MIM:151510" /translation="MTRTRAALLLFTALATSLGFNLDTEELTAFRVDSAGFGDSVVQY ANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSP SQLLACGPTVHHECGRNMYLTGLCFLLGPTQLTQRLPVSRQECPRQEQDIVFLIDGSG SISSRNFATMMNFVRAVISQFQRPSTQFSLMQFSNKFQTHFTFEEFRRSSNPLSLLAS VHQLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMA DAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDALKDIQNQLKEKIF AIEGTETTSSSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNMSPTFIN MSQENVDMRDSYLGYSTELALWKGVQSLVLGAPRYQHTGKAVIFTQVSRQWRMKAEVT GTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDA VLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEKENRGAVYLFHGVLGPSISP SHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLAVGARGQVLLLRTRPVLWVGVS MQFIPAEIPRSAFECREQVVSEQTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALD PGRLSPRATFQETKNRSLSRVRVLGLKAHCENFNLLLPSCVEDSVTPITLRLNFTLVG KPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGLKSLLVGSN LELNAEVMVWNDGEDSYGTTVTFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ GTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPRTSKTTF QLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFW VPVELNQEAVWMDVEVSHPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDCSIAGCLRF RCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAEITFDTSVYSQLPGQEAF MRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFFKRQYKEMMEEANG QIAPENGTQTPSPPTPHYPQDNV" BASE COUNT 925 a 1176 c 1111 g 830 t ORIGIN 1 ggagctcaga gctccacatc tgaccttcta gtcatgacca ggaccagggc agcactcctc 61 ctgttcacag ccttagcaac ttctctaggt ttcaacttgg acacagagga gctgacagcc 121 ttccgtgtgg acagcgctgg gtttggagac agcgtggtcc agtatgccaa ctcctgggtg 181 gtggttggag ccccccaaaa gataacagct gccaaccaaa cgggtggcct ctaccagtgt 241 ggctacagca ctggtgcctg tgagcccatc ggcctgcagg tgcccccgga ggccgtgaac 301 atgtccctgg gcctgtccct ggcgtctacc accagccctt cccagctgct ggcctgcggc 361 cccaccgtgc accacgagtg cgggaggaac atgtacctca ccggactctg cttcctcctg 421 ggccccaccc agctcaccca gaggctcccg gtgtccaggc aggagtgccc aagacaggag 481 caggacattg tgttcctgat cgatggctca ggcagcatct cctcccgcaa ctttgccacg 541 atgatgaact tcgtgagagc tgtgataagc cagttccaga gacccagcac ccagttttcc 601 ctgatgcagt tctccaacaa attccaaaca cacttcactt tcgaggaatt caggcgcagc 661 tcaaaccccc tcagcctgtt ggcttctgtt caccagctgc aagggtttac atacacggcc 721 accgccatcc aaaatgtcgt gcaccgattg ttccatgcct catatggggc ccgtagggat 781 gccgccaaaa ttctcattgt catcactgat gggaagaaag aaggcgacag cctggattat 841 aaggatgtca tccccatggc tgatgcagca ggcatcatcc gctatgcaat tggggttgga 901 ttagcttttc aaaacagaaa ttcttggaaa gaattaaatg acattgcatc gaagccctcc 961 caggaacaca tatttaaagt ggaggacttt gatgctctga aagatattca aaaccaactg 1021 aaggagaaga tctttgccat tgagggtacg gagaccacaa gcagtagctc cttcgaattg 1081 gagatggcac aggagggctt cagcgctgtg ttcacacctg atggccccgt tctgggggct 1141 gtggggagct tcacctggtc tggaggtgcc ttcctgtacc ccccaaatat gagccctacc 1201 ttcatcaaca tgtctcagga gaatgtggac atgagggact cttacctggg ttactccacc 1261 gagctggccc tctggaaagg ggtgcagagc ctggtcctgg gggccccccg ctaccagcac 1321 accgggaagg ctgtcatctt cacccaggtg tccaggcaat ggaggatgaa ggccgaagtc 1381 acggggactc agatcggctc ctacttcggg gcctccctct gctccgtgga cgtagacagc 1441 gacggcagca ccgacctggt cctcatcggg gccccccatt actacgagca gacccgaggg 1501 ggccaggtgt ctgtgtgtcc cttgcccagg gggtggagaa ggtggtggtg tgatgctgtt 1561 ctctacgggg agcagggcca cccctggggt cgctttgggg cggctctgac agtgctgggg 1621 gatgtgaatg gggacaagct gacagacgtg gtcatcgggg ccccaggaga gaaggagaac 1681 cggggtgctg tctacctgtt tcacggagtc ttgggaccca gcatcagccc ctcccacagc 1741 cagcggatcg cgggctccca gctctcctcc aggctgcagt attttgggca ggcactgagc 1801 gggggtcaag acctcaccca ggatggactg gtggacctgg ctgtgggggc ccggggccag 1861 gtgctcctgc tcaggaccag acctgtgctc tgggtggggg tgagcatgca gttcatacct 1921 gccgagatcc ccaggtctgc gtttgagtgt cgggagcagg tggtctctga gcagaccctg 1981 gtacagtcca acatctgcct ttacattgac aaacgttcta agaacctgct tgggagccgt 2041 gacctccaaa gctctgtgac cttggacctg gccctcgacc ctggccgcct gagtccccgt 2101 gccaccttcc aggaaacaaa gaaccggagt ctgagccgag tccgagtcct cgggctgaag 2161 gcacactgtg aaaacttcaa cctgctgctc ccgagctgcg tggaggactc tgtgaccccc 2221 attaccttgc gtctgaactt cacgctggtg ggcaagcccc tccttgcctt cagaaacctg 2281 cggcctatgc tggccgccga tgctcagaga tacttcacgg cctccctacc ctttgagaag 2341 aactgtggag ccgaccatat ctgccaggac aatctcggca tctccttcag cttcccaggc 2401 ttgaagtccc tgctggtggg gagtaacctg gagctgaacg cagaagtgat ggtgtggaat 2461 gacggggaag actcctacgg aaccaccgtc accttctccc accccgcagg actgtcctac 2521 cgctacgtgg cagagggcca gaaacaaggg cagctgcgtt ccctgcacct gacatgtgac 2581 agcgccccag ttgggagcca gggcacctgg agcaccagct gcagaatcaa ccacctcatc 2641 ttccgtggcg gcgcccagat caccttcttg gctacctttg acgtctcccc caaggctgtc 2701 ctgggagacc ggctgcttct gacagccaat gtgagcagtg agaacaacac tcccaggacc 2761 agcaagacca ccttccagct ggagctcccg gtgaagtatg ctgtctacac tgtggttagc 2821 agccacgaac aattcaccaa atacctcaac ttctcagagt ctgaggagaa ggaaagccat 2881 gtggccatgc acagatacca ggtcaataac ctgggacaga gggacctgcc tgtcagcatc 2941 aacttctggg tgcctgtgga gctgaaccag gaggctgtgt ggatggatgt ggaggtctcc 3001 cacccccaga acccatccct tcggtgctcc tcagagaaaa tcgcaccccc agcatctgac 3061 ttcctggcgc acattcagaa gaatcccgtg ctggactgct ccattgctgg ctgcctgcgg 3121 ttccgctgtg acgtcccctc cttcagcgtc caggaggagc tggatttcac cctgaagggc 3181 aacctcagct ttggctgggt ccgccagata ttgcagaaga aggtgtcggt cgtgagtgtg 3241 gctgaaatta cgttcgacac atccgtgtac tcccagcttc caggacagga ggcatttatg 3301 agagctcaga cgacaacggt gctggagaag tacaaggtcc acaaccccac ccccctcatc 3361 gtaggcagct ccattggggg tctgttgctg ctggcactca tcacagcggt actgtacaaa 3421 gttggcttct tcaagcgtca gtacaaggaa atgatggagg aggcaaatgg acaaattgcc 3481 ccagaaaacg ggacacagac ccccagcccg cccactcccc attaccctca ggacaatgtc 3541 tgaactctcc agcttcgcgt gagaagtccc cttccatccc agagggtggg cttcagggcg 3601 cacagcatga gaggctctgt gcccccatca ccctcgtttc cagtgaatta gtgtcatgtc 3661 agcatcagct cagggcttca tcgtggggct ctcagttccg atttcccagg ctgaattggg 3721 agtgagatgc ctgcatgctg ggttctgcac agctggcctc ccgcgttggg caacattgct 3781 ggctggaagg gaggagcgcc ctctagggag ggacatggcc ccggtgcggc tgcagctcac 3841 ccagccccag gggcagaaga gacccaacca cttctatttt ttgaggctat gaatatagta 3901 cctggaaaaa tgccaagaca tgattatttt tttaaaaagc gtactttaaa tgtttgtgtt 3961 aataaattaa aacatgcaca aaaagatgca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 4021 aaaaaaaaaa aaaaaaaaaa aa //