LOCUS       BC038229                4222 bp    mRNA    linear   HUM 18-AUG-2006
DEFINITION  Homo sapiens patatin-like phospholipase domain containing 6, mRNA
            (cDNA clone IMAGE:4509888), partial cds.
ACCESSION   BC038229
VERSION     BC038229.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 4222)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 4222)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 68 Row: f Column: 12.
FEATURES             Location/Qualifiers
     source          1..4222
                     /db_xref="H-InvDB:HIT000095146"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:4509888"
                     /tissue_type="Testis, embryonal carcinoma"
                     /clone_lib="NIH_MGC_92"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            <1..4222
                     /gene="PNPLA6"
                     /gene_synonym="NTE"
                     /gene_synonym="sws"
                     /db_xref="GeneID:10908"
                     /db_xref="HGNC:HGNC:16268"
                     /db_xref="MIM:603197"
     CDS             <1..4001
                     /gene="PNPLA6"
                     /gene_synonym="NTE"
                     /gene_synonym="sws"
                     /codon_start=3
                     /product="PNPLA6 protein"
                     /protein_id="AAH38229.1"
                     /db_xref="GeneID:10908"
                     /db_xref="HGNC:HGNC:16268"
                     /db_xref="MIM:603197"
                     /translation="TRPVCGAQPVPFVPQVLGVMIGAGVAVVVTAVLILLVVRRLRVP
                     KTPAPDGPRYRFRKRDKVLFYGRKIMRKVSQSTSSLVDTSVSATSRPRMRKKLKMLNI
                     AKKILRIQKETPTLQRKEPPPAVLEADLTEGDLANSHLPSEVLYMLKNVRVLGHFEKP
                     LFLELCRHMVFQRLGQGDYVFRPGQPDASIYVVQDGLLELCLPGPDGKECVVKEVVPG
                     DSVNSLLSILDVITGHQHPQRTVSARAARDSTVLRLPVEAFSAVFTKYPESLVRVVQI
                     IMVRLQRVTFLALHNYLGLTNELFSHEIQPLRLFPSPGLPTRTSPVRGSKRMVSTSAT
                     DEPRETPGRPPDPTGAPLPGPTGDPVKPTSLETPSPPLLSRCVSMPGDISGLQGGPRS
                     DFDMAYERGRISVSLQEEASGGSLAAPARTPTQEPREQPAGACEYSYCEDESATGGCP
                     FGPYQGRQTSSIFEAAKQELAKLMRIEDPSLLNSRVLLHHAKAGTIIARQGDQDVSLH
                     FVLWGCLHVYQRMIDKAEDVCLFVAQPGELVGQLAVLTGEPLIFTLRAQRDCTFLRIS
                     KSDFYEIMRAQPSVVLSAAHTVAARMSPFVRQMDFAIDWTAVEAGRALYRQGDRSDCT
                     YIVLNGRLRSVIQRGSGKKELVGEYGRGDLIGVVEALTRQPRATTVHTVRDTELAKLP
                     EGTLGHIKRRYPQVVTRLIHLLSQKILGNLQQLQGPFPGSGLGVPPHSELTNPASNLA
                     TVAILPVCAEVPMVAFTLELQHALQAIGPTLLLNSDIIRARLGASALDSIQEFRLSGW
                     LAQQEDAHRIVLYQTDASLTPWTVRCLRQADCILIVGLGDQEPTLGQLEQMLENTAVR
                     ALKQLVLLHREEGAGPTRTVEWLNMRSWCSGHLHLRCPRRLFSRRSPAKLHELYEKVF
                     SRRADRHSDFSRLARVLTGNTIALVLGGGGARGCSHIGVLKALEEAGVPVDLVGGTSI
                     GSFIGALYAEERSASRTKQRAREWAKSMTSVLEPVLDLTYPVTSMFTGSAFNRSIHRV
                     FQDKQIEDLWLPYFNVTTDITASAMRVHKDGSLWRYVRASMTLSGYLPPLCDPKDGHL
                     LMDGGYINNLPADIARSMGAKTVIAIDVGSQDETDLSTYGDSLSGWWLLWKRLNPWAD
                     KVKVPDMAEIQSRLAYVSCVRQLEVVKSSSYCEYLRPPIDCFKTMDFGKFDQIYDVGY
                     QYGKAVFGGWSRGNVIEKMLTDRRSTDLNESRRADVLAFPSSGFTDLAEIVSRIEPPT
                     SYVSDGCADGEESDCLTEYEEDAGPDCSRDEGGSPEGASPSTASEMEEEKSILRQRRC
                     LPQEPPGSATDA"
BASE COUNT          792 a         1366 c         1317 g          747 t
ORIGIN      
        1 ccacgcgtcc ggtttgcggt gcgcagccag tgccgttcgt ccctcaggtg cttggcgtga
       61 tgatcggggc cggagtggcg gtggtggtca cggccgtgct catcctcctg gtggtgcgga
      121 ggctgcgagt gccaaaaacc ccagccccgg atggcccccg gtatcggttc cggaagaggg
      181 acaaagtgct cttctatggc cggaagatta tgcggaaggt gtcacaatcc acctcctccc
      241 tcgtggatac ctctgtctcc gccacctccc ggccacgcat gaggaagaaa ctgaagatgc
      301 tcaacattgc caagaagatc ctgcgcatcc agaaagagac gcccacgctg cagcggaagg
      361 agcccccgcc cgcagtgcta gaagctgacc tgaccgaggg cgacctggct aactcccatc
      421 tgccctctga agtgctttat atgctcaaga acgtccgggt gctgggccac ttcgagaagc
      481 cactcttcct ggagctctgc cgccacatgg tcttccagcg gctgggccag ggtgactacg
      541 tcttccggcc gggccagcca gatgccagca tctacgtggt gcaggacggg ctgctggagc
      601 tctgtctgcc agggcctgac gggaaggagt gtgtggtgaa ggaagtggtt cctggggaca
      661 gcgtcaacag ccttctcagc atcctggatg tcatcaccgg tcaccagcat ccccagcgga
      721 ccgtgtctgc ccgggcggcc cgggactcca cagtgctgcg cctgccggtg gaagcattct
      781 ccgcggtctt caccaagtac ccggagagct tggtgcgggt cgtgcagatc atcatggtgc
      841 ggctgcagcg agtcaccttc ctggcactgc acaactacct gggtctgacc aatgagctct
      901 tcagccacga gatccagccc ctgcgtctgt tccccagccc cggcctccca actcgcacca
      961 gccctgtgcg gggctccaag agaatggtca gcacctcagc tacagacgag cccagggaga
     1021 ccccagggcg gccacccgat cccaccgggg ccccgctgcc tggacctaca ggggaccctg
     1081 tgaagcccac atccctggaa accccctcgc cccctctgct gagccgctgc gtctccatgc
     1141 caggggacat ctcaggcttg cagggtggcc cccgctccga cttcgacatg gcctatgagc
     1201 gtggccggat ctccgtgtcc ctgcaggaag aggcctccgg ggggtccctg gcagcccccg
     1261 ctcggacccc cactcaggag cctcgtgagc agccggcagg cgcctgtgaa tacagctact
     1321 gtgaggatga gtcggccact ggtggctgcc ctttcgggcc ctaccagggc cgccagacca
     1381 gcagcatctt cgaggcagca aagcaggagc tggccaagct gatgcggatt gaggacccct
     1441 ccctcctgaa cagcagagtc ttgctgcacc acgccaaagc tggcaccatc attgcccgcc
     1501 agggagacca ggacgtgagc ctgcacttcg tgctctgggg ctgcctgcac gtgtaccagc
     1561 gcatgatcga caaggcggag gacgtgtgcc tgttcgtagc gcagcccggg gaactggtgg
     1621 ggcagctggc ggtgctcact ggcgaacctc tcatcttcac actgcgagcc caacgcgact
     1681 gcaccttcct gcggatctcc aagtccgact tctatgagat catgcgcgca cagcccagtg
     1741 tggtgctgag tgcggcgcac acggtggcag ccaggatgtc gcccttcgtg cgccagatgg
     1801 acttcgccat cgactggact gcagtggagg cgggacgcgc gctgtacagg cagggcgacc
     1861 gctccgactg cacttacatc gtgctcaatg ggcggctgcg tagcgtgatc cagcgaggca
     1921 gtggcaagaa ggagctggtg ggcgagtacg gccgcggcga cctcatcggc gtggtggagg
     1981 cactgacccg gcagccacga gccacgacgg tgcacacggt gcgcgacacg gagctggcca
     2041 agcttcccga gggcaccttg ggtcacatca aacgccggta cccgcaggtc gtgacccgcc
     2101 ttatccacct actgagccag aaaattctag ggaatttgca gcagctgcaa ggacccttcc
     2161 caggctctgg gttgggtgtg cccccacact cggaactcac caacccagcc agcaacctgg
     2221 caactgtggc aatcctgcct gtgtgtgctg aggtccccat ggtggccttc acgctggagc
     2281 tgcagcacgc cctgcaggcc atcggtccga cgctactcct taacagtgac atcatccggg
     2341 cacgcctggg ggcctccgca ctggatagca tccaagagtt ccggctgtca gggtggctgg
     2401 cccagcagga ggatgcacac cgtatcgtac tctaccagac ggacgcctcg ctgacgccct
     2461 ggaccgtgcg ctgcctgcga caggccgact gcatcctcat tgtgggcctg ggggaccagg
     2521 agcctaccct cggccagctg gagcagatgc tggagaacac ggctgtgcgc gcccttaagc
     2581 agctagtcct gctccaccga gaggagggcg cgggccccac gcgcaccgtg gagtggctaa
     2641 atatgcgcag ctggtgctcg gggcacctgc acctgcgctg tccgcgccgc ctcttttcgc
     2701 gccgcagccc tgccaagctg catgagctct acgagaaggt tttctccagg cgcgcggacc
     2761 ggcacagcga cttctcccgc ttggcgaggg tgctcacggg gaacaccatt gcccttgtgc
     2821 taggcggggg cggggccagg ggctgctcgc acatcggagt actaaaggca ttagaggagg
     2881 cgggggtccc cgtggacctg gtgggcggca cgtccattgg ctctttcatc ggagcgttgt
     2941 acgcggagga gcgcagcgcc agccgcacga agcagcgggc ccgggagtgg gccaagagca
     3001 tgacttcggt gctggaacct gtgttggacc tcacgtaccc agtcacctcc atgttcactg
     3061 ggtctgcctt taaccgcagc atccatcggg tcttccagga taagcagatt gaggacctgt
     3121 ggctgcctta cttcaacgtg accacagata tcaccgcctc agccatgcga gtccacaaag
     3181 atggctccct gtggcggtac gtgcgcgcca gcatgacgct gtcgggctac ctgcccccgc
     3241 tgtgcgaccc caaggacggg cacctactca tggatggcgg ctacatcaac aatctgccag
     3301 cggacatcgc ccgcagcatg ggtgccaaaa cggtcatcgc cattgacgtg gggagccagg
     3361 atgagacgga cctcagcacc tacggggaca gcctgtccgg ctggtggctg ctgtggaagc
     3421 ggctgaatcc ctgggctgac aaggtaaagg ttccagacat ggctgaaatc cagtcccgcc
     3481 tggcctacgt gtcctgtgtg cggcagctag aggttgtcaa gtccagctcc tactgcgagt
     3541 acctgcgccc gcccatcgac tgcttcaaga ccatggactt tgggaagttc gaccagatct
     3601 atgatgtggg ctaccagtac gggaaggcgg tgtttggagg ctggagccgt ggcaacgtca
     3661 ttgagaaaat gctcacagac cggcggtcta cagaccttaa tgagagccgc cgtgcagacg
     3721 tgcttgcctt cccaagctct ggcttcactg acttggcaga gattgtgtcc cggattgagc
     3781 cccccacgag ctatgtctct gatggctgtg ctgacggaga ggagtcagat tgtctgacag
     3841 agtatgagga ggacgccgga cccgactgct cgagggatga aggggggtcc cccgagggcg
     3901 caagccccag cactgcctcc gagatggagg aggagaagtc gattctccgg caacgacgct
     3961 gtctgcccca ggagccgccc ggctcagcca cagatgcctg aggacctcga caggggtcac
     4021 cccctccctc ccacccctgg actgggctgg gggtggcccc gtgggggtag ctcactcccc
     4081 ctcctgctgc tatgcctgtg acccccgcgg cccacacact ggactgacct gccctgagcg
     4141 gggatgcagt gttgcactga tgacttgacc agcccctccc ccaataaact cgcctcttgg
     4201 aaaaaaaaaa aaaaaaaaaa aa
//