LOCUS BC038099 2491 bp mRNA linear HUM 08-DEC-2006
DEFINITION Homo sapiens syntaxin binding protein 3, mRNA (cDNA clone MGC:26241
IMAGE:4826366), complete cds.
ACCESSION BC038099
VERSION BC038099.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2491)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2491)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC038099.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: n Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6005885.
FEATURES Location/Qualifiers
source 1..2491
/db_xref="H-InvDB:HIT000051987"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26241 IMAGE:4826366"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2491
/gene="STXBP3"
/gene_synonym="MUNC18-3"
/gene_synonym="MUNC18C"
/gene_synonym="PSP"
/gene_synonym="UNC-18C"
/db_xref="GeneID:6814"
/db_xref="HGNC:HGNC:11446"
/db_xref="MIM:608339"
CDS 15..1793
/gene="STXBP3"
/gene_synonym="MUNC18-3"
/gene_synonym="MUNC18C"
/gene_synonym="PSP"
/gene_synonym="UNC-18C"
/codon_start=1
/product="syntaxin binding protein 3"
/protein_id="AAH38099.1"
/db_xref="GeneID:6814"
/db_xref="HGNC:HGNC:11446"
/db_xref="MIM:608339"
/translation="MAPPVAERGLKSVVWQKIKATVFDDCKKEGEWKIMLLDEFTTKL
LASCCKMTDLLEEGITVVENIYKNREPVRQMKALYFITPTSKSVDCFLHDFASKSENK
YRAAYIYFTDFCPDNLFNKIKASCSKSIRRCKEINISFIPHESQVYTRDVPDAFYYCY
SPDPGNAKGKDAIMETMADQIVTVCATLDENPGVRYKSKPLDNASKLAQLVEKKLEDY
YKIDEKSLIKGKTHSQLLIIDRGFDPVSTVLHELTFQAMAYDLLPIENDTYKYKTDGK
EKEAILEEEDDLWVRIRHRHIAVVLEEIPKLMKEISSTKKATEGKTSLSALTQLMKKM
PHFRKQITKQVVHLNLAEDCMNKFKLNIEKLCKTEQDLALGTDAEGQKVKDSMRVLLP
VLLNKNHDNCDKIRAILLYIFSINGTTEENLDRLIQNVKIENESDMIRNWSYLGVPIV
PQSQQGKPLRKDRSAEETFQLSRWTPFIKDIMEDAIDNRLDSKEWPYCSQCPAVWNGS
GAVSARQKPRANYLEDRKNGSKLIVFVIGGITYSEVRCAYEVSQAHKSCEVIIGSTHV
LTPKKLLDDIKMLNKPKDKVSLIKDE"
BASE COUNT 909 a 376 c 483 g 723 t
ORIGIN
1 gcagtgtggg gaagatggcg ccgccggtgg cagagagggg gctaaagagc gtcgtgtggc
61 agaagataaa agcaacagtg tttgatgact gcaagaaaga aggcgaatgg aagataatgc
121 ttttagatga atttaccact aagcttttgg catcgtgttg caaaatgaca gatcttctag
181 aagaaggtat tactgttgta gagaatattt ataagaaccg tgaacctgtc agacaaatga
241 aagctcttta tttcatcact ccgacatcaa agtctgtaga ttgtttctta catgattttg
301 caagtaaatc ggagaacaag tatagagcag catatattta cttcactgac ttttgccctg
361 ataatctctt taacaaaatt aaggcttctt gctccaagtc aataagaaga tgtaaagaaa
421 taaatatttc cttcattcca catgaatctc aggtgtatac tcgtgatgta ccagatgcat
481 tctattactg ttatagtcca gaccctggta atgcaaaggg aaaagatgcc attatggaaa
541 caatggctga ccagatagtt acagtgtgtg ccaccttgga tgaaaatccc ggagtaagat
601 ataaaagtaa acctctagat aatgccagta agcttgcaca gcttgttgaa aaaaagcttg
661 aagactacta caagattgat gaaaagagcc taataaaggg taaaactcat tcacagctct
721 taataattga tcgtggcttt gatcctgtgt ccactgtcct gcatgaactg acctttcagg
781 caatggcata tgatctacta ccaattgaga atgatacata caaatataaa acagatggaa
841 aagaaaagga ggccatcctt gaagaagaag atgacctctg ggttagaatt cgacatcgac
901 atattgcggt tgtgttagag gaaattccca agcttatgaa agaaatttca tcaacaaaga
961 aagcaacaga aggaaagaca tcacttagtg ctcttaccca gctgatgaaa aagatgcccc
1021 atttccgaaa acagattact aagcaagttg tccatcttaa cttagcagaa gattgcatga
1081 ataagttcaa gcttaatata gaaaagctct gcaaaactga acaggacctc gcacttggaa
1141 ctgatgcaga aggacagaag gtgaaagatt ccatgcgagt actccttcca gttctactca
1201 acaaaaatca tgataattgt gataaaataa gagcaattct actttatatc ttcagtatta
1261 atggaactac ggaagaaaat ttggacaggt tgatccagaa tgtaaagata gaaaatgaga
1321 gtgacatgat tcgtaactgg agttaccttg gtgttcccat tgttccccaa tctcaacaag
1381 gcaaaccgtt aagaaaggat cggtctgcag aagaaacttt tcagctctct cggtggacac
1441 cttttatcaa agatattatg gaggatgcta ttgataatag attagattca aaagaatggc
1501 catattgttc ccagtgtcca gcagtatgga atggttcagg agctgtaagt gctcgccaga
1561 aacccagagc taattattta gaagaccgaa aaaatgggtc aaagctgatt gtttttgtaa
1621 ttggagggat cacatactct gaagtgcgtt gtgcttatga agtttctcag gcacataaat
1681 cctgtgaagt tattattggt tctacacatg ttttaacacc caaaaagctg ttggatgata
1741 taaagatgct gaataaaccc aaggataaag tctccttaat taaagatgaa tagcatttct
1801 ttttggaggg tttagagatt cttactaata tgttgaacta aaatagaaag aaaatgttgc
1861 tgtcatgtaa tttaaacaat gtaaatattt tatggaataa tggcttttca aatacatttc
1921 ttaaggaact gtttatgatt attactggat ttgtcatttt tgataattta aatattgctg
1981 ctgctttgta gatgatgaga agaaatgtta aagtgctttc taaaaggaaa ttttttcacc
2041 tttggaggag aatatattag agttgtgggt aatttttcac agccacctat gtacatacta
2101 attacccatt ggatacttat atctaaaagt ctcatgctga agtatagttt ttgggaaaga
2161 atgattttaa ataaagagat tgtaaaagta aaaaactgta aatgtatatg tatgatagaa
2221 ttgtttcctc taagtgtagt ttttctttca actaaaattc agtttatgtg taaaataatt
2281 cagtcattaa tagaaatgga gtgatttcac agtgtgtact gttttgccac atacttctaa
2341 agaacacaat tttatataat tttgaaatca tgtatgttta aattagaaaa ccaaaaatca
2401 tgaacattct aagagaaaat aaatatagaa tttaaaaaaa aaaaaaaaaa aaaaaaaaaa
2461 aaaaaaaaaa aaaagaaaaa aaaaaaaaaa a
//