LOCUS BC038094 851 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens intraflagellar transport 20 homolog (Chlamydomonas),
mRNA (cDNA clone MGC:47841 IMAGE:3907361), complete cds.
ACCESSION BC038094
VERSION BC038094.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 851)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 851)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: a Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222241.
FEATURES Location/Qualifiers
source 1..851
/db_xref="H-InvDB:HIT000051986"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47841 IMAGE:3907361"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..851
/gene="IFT20"
/db_xref="GeneID:90410"
/db_xref="HGNC:HGNC:30989"
/db_xref="IMGT/GENE-DB:30989"
/db_xref="MIM:30989"
CDS 119..517
/gene="IFT20"
/codon_start=1
/product="IFT20 protein"
/protein_id="AAH38094.1"
/db_xref="GeneID:90410"
/db_xref="HGNC:HGNC:30989"
/db_xref="IMGT/GENE-DB:30989"
/db_xref="MIM:30989"
/translation="MAKDILGEAGLHFDELNKLRVLDPEVTQQTIELKEECKDFVDKI
GQFQKIVGGLIELVDQLAKEAENEKMKAIGARNLLKSIAKQREAQQQQLQALIAEKKM
QLERYRVEYEALCKVEAEQNEFIDQFIFQK"
BASE COUNT 270 a 175 c 213 g 193 t
ORIGIN
1 ccacgcgtcc gagcggccgt ggcaggctgg ctgggtaccg gctgtcgctg acccaggaga
61 agctgcctgt ctacatcagc ctgggctgca gcgcgctgcc gccgcggggc cggcagccat
121 ggccaaggac atcctgggtg aagcagggct acactttgat gaactgaaca agctgagggt
181 gttggaccca gaggttaccc agcagaccat agagctgaag gaagagtgca aagactttgt
241 ggacaaaatt ggccagtttc agaaaatagt tggtggttta attgagcttg ttgatcaact
301 tgcaaaagaa gcagaaaatg aaaagatgaa ggccatcggt gctcggaact tgctcaaatc
361 tatagcaaag cagagagaag ctcaacagca gcaacttcaa gccctaatag cagaaaagaa
421 aatgcagcta gaaaggtatc gggttgaata tgaagctttg tgtaaagtag aagcagaaca
481 aaatgaattt attgaccaat ttatttttca gaaatgaact gaaaatttcg cttttatagt
541 aggaaggcaa aacaaaaaaa gcctctcaaa accaaaaaaa cctctgtagc attccagcgg
601 cttgaccaat gacctatgtc acaagaggtg gcgtgtaagg aatgcagccc cctgaagaca
661 gcactacaag tctgggggag ccagttttaa catcagtgca cagctgctgc tggtggccct
721 gcagtgtacg ttctcacctc ttatgcttag ttggaactaa gcagtttgta aactttcatc
781 cttttttttg taaattcaca aagctttgga aggagaagca ataaattttt gttttcaaaa
841 aaaaaaaaaa a
//