LOCUS BC037991 1903 bp mRNA linear HUM 12-JAN-2006
DEFINITION Homo sapiens coiled-coil domain containing 46, mRNA (cDNA clone
IMAGE:5535087), partial cds.
ACCESSION BC037991
VERSION BC037991.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1903)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1903)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC037991.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 78 Row: p Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1903
/db_xref="H-InvDB:HIT000095086"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5535087"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>1903
/gene="CCDC46"
/gene_synonym="MGC33887"
/db_xref="GeneID:201134"
/db_xref="HGNC:HGNC:28514"
/db_xref="IMGT/GENE-DB:28514"
/db_xref="MIM:28514"
CDS 500..>1903
/gene="CCDC46"
/gene_synonym="MGC33887"
/codon_start=1
/product="CCDC46 protein"
/protein_id="AAH37991.1"
/db_xref="GeneID:201134"
/db_xref="HGNC:HGNC:28514"
/db_xref="IMGT/GENE-DB:28514"
/db_xref="MIM:28514"
/translation="MSIYFDEPNPARAKGSSPEGLPAWVLGELETSEHKLNESWKLSS
GEDNTLVQSPTDVYSREQYTGKLRVRSHSLSPTHREDGQNITPKICEVYSKKSPVSLD
DSDIEARLNSWNLGIENPRYLRQKPIPVSLMTPKFSLRKSSSFHDDHFLSRIREKELD
MKTKMMEAKFHEEKLKLQQKHDADVQKILERKNNEIEELKTLYRSKQHETEETIRKLE
KKVQTLIRDCQVIRETKEDQIAELKKICEQSTESLNNDWEKKLHNAVAEMEQEKFDLQ
KQHTENIQELLEDTNVRLNKMESEYMAQTQSTNHMIKELEARVQQLTGEAENSNLQRQ
KLIQEKAELERCYQITCSELQEVKARRNTLHKEKDHLVNDYEQNMKLLQTKYDADINL
LKQEHALSASKASSMIEELEQNVCQLKQQLQESELQRKQQLRDQENKFQMEKSHLKHI
YEKKAHDLQSELDKKKKK"
BASE COUNT 695 a 341 c 444 g 423 t
ORIGIN
1 ggcctggggg gcgcgcgccc ctggggtccc ggcgctgccc gctgtggtgt ccccggcagg
61 cagagcgcga tccaggccgg gacgacttgg gaaagttcta agtaaagttt gatcagccgg
121 tttgatcggt ctgacgtggt ccaagagtct gacccaaggg tttgcgactg ggagaggaaa
181 tctgtgtcct ggacaagatt ggattatgga agtgggaagt gaagaagaaa aatgggagaa
241 gctggatgca gaatttgatc actttgtggt tgatatgaag ccctttgttc taaaattacc
301 tcataggaca gaacggcaga ggtgtgctct ttggattaga aagctgtgcg aaccttcagg
361 aacaggtgca ggaataatgg ggaggaagaa tcggaacctg tatgcaaaat tgttattgca
421 tatgcttaaa cgaggtgcgc ttgaaggccc ttttacacac cgacctgaac ccgggacact
481 aaaaattcta ccttcataca tgtccatcta ttttgatgaa ccaaatccag cacgagcaaa
541 aggttcaagc ccagagggat taccagcctg ggtactgggt gagctggaga caagtgaaca
601 caaattaaat gaatcatgga aactctcttc tggagaagat aacactttag tacagtcgcc
661 aactgatgtc tacagcaggg aacagtacac tgggaagctc cgagtgagat cacactcctt
721 gagtccaact cacagagaag atggacaaaa tattacccca aagatttgtg aagtttattc
781 gaaaaaatct cctgtttctt tggatgatag tgacattgaa gctcgcctta atagttggaa
841 tcttgggata gaaaatcctc gatacctgag acagaagcct atcccagttt ctctgatgac
901 accgaaattc agcctgagaa aatccagcag tttccatgat gatcattttc tctctcgaat
961 acgtgagaaa gagctggaca tgaaaacaaa aatgatggaa gctaaatttc atgaagaaaa
1021 gcttaaactg caacagaaac atgatgctga tgttcagaag attttagaaa gaaagaataa
1081 tgaaatagaa gaactgaaaa ctttatacag gagtaaacaa catgaaactg aagagactat
1141 tagaaagctt gaaaagaaag ttcagacact gatacgtgac tgtcaagtta tcagagagac
1201 taaagaagac cagattgcag agctgaaaaa gatatgtgaa caaagtacgg aatctctaaa
1261 taatgactgg gaaaaaaagc ttcacaatgc tgtagcagaa atggaacagg aaaagtttga
1321 tcttcaaaag caacacactg aaaacattca agaattgctt gaggatacaa atgtgcgtct
1381 gaataaaatg gagagtgaat acatggcgca aacacagtcc acaaaccaca tgatcaaaga
1441 actggaggcc cgtgtccagc agctgactgg agaagcagag aacagtaatt tacagaggca
1501 gaaattaatt caagaaaaag cagaacttga aagatgttac cagataacgt gtagtgaatt
1561 acaagaagta aaggcaaggc gtaacacact gcataaagag aaggaccatc ttgtaaatga
1621 ttatgagcaa aacatgaaac tgttacaaac caaatatgat gctgatataa accttctaaa
1681 acaagaacat gctctttcag cttctaaggc atctagtatg attgaagaat tagagcagaa
1741 tgtctgtcaa ttaaaacagc agttacagga atcagaactt caaagaaagc aacaactaag
1801 ggatcaagaa aataagtttc agatggagaa aagtcatcta aaacacatct atgaaaaaaa
1861 ggctcatgac ttgcagagtg aacttgataa aaaaaaaaaa aaa
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