LOCUS BC037572 2398 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens family with sequence similarity 117, member A, mRNA
(cDNA clone MGC:44930 IMAGE:5526752), complete cds.
ACCESSION BC037572
VERSION BC037572.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2398)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2398)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: i Column: 6.
FEATURES Location/Qualifiers
source 1..2398
/db_xref="H-InvDB:HIT000051940"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:44930 IMAGE:5526752"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2398
/gene="FAM117A"
/db_xref="GeneID:81558"
/db_xref="HGNC:HGNC:24179"
CDS 82..1443
/gene="FAM117A"
/codon_start=1
/product="family with sequence similarity 117, member A"
/protein_id="AAH37572.1"
/db_xref="GeneID:81558"
/db_xref="HGNC:HGNC:24179"
/translation="MAGAAAGGRGGGAWGPGRGGAGGLRRGCSPPAPAGSPRAGLQPL
RATIPFQLQQPHQRRDGGGRAASVPCSVAPEKSVCRPQPLQVRRTFSLDTILSSYLLG
QWPRDADGAFTCCTNDKATQTPLSWQELEGERASSCAHKRSASWGSTDHRKEISKLKQ
QLQRTKLSRSGKEKERGSPLLGDHAVRGALRASPPSFPSGSPVLRLSPCLHRSLEGLN
QELEEVFVKEQGEEELLRILDIPDGHRAPAPPQSGSCDHPLLLLEPGNLASSPSMSLA
SPQPCGLASHEEHRGAAEELASTPNDKASSPGHPAFLEDGSPSPVLAFAASPRPNHSY
IFKREPPEGCEKVRVFEEATSPGPDLAFLTSCPDKNKVHFNPTGSAFCPVNLMKPLFP
GMGFIFRNCPSNPGSPLPPASPRPPPRKDPEASKASPLPFEPWQRTPPSEEPVLFQSS
LMV"
BASE COUNT 507 a 759 c 636 g 496 t
ORIGIN
1 ccacgcgtcc ggcagcggcc tcgggggttg gggggctgtg tgagtctcgc agtggggctg
61 aggcaggcag ccgggagagc catggcgggg gccgcagcgg gcggcagagg cggaggtgcc
121 tgggggccgg ggcgcggagg ggccgggggg ctccggcggg gctgctctcc cccagccccc
181 gccggctccc cccgggctgg gctgcagccg ctcagggcca cgatcccctt ccagctgcag
241 cagccgcacc agcgccggga cgggggtggc cgtgcagcca gcgtcccatg ctcggtggcc
301 ccagaaaagt cagtgtgtag gcctcagcca cttcaggtcc ggcgtacatt ctccctggac
361 accatcctca gctcctacct tctgggccag tggccacgag atgctgatgg ggccttcacc
421 tgctgcacca atgacaaggc cacccagacg cccctgtcct ggcaagagct agaaggtgag
481 cgtgccagtt cctgtgcaca caagcgctca gcatcctggg gcagcacaga ccaccgaaaa
541 gagatttcca agttgaagca acaactgcag aggacgaagc tgagccgcag tgggaaagag
601 aaggagcgag gttcaccact cctaggggac cacgcagtgc ggggagcact gagggcgtcc
661 cctcccagct tcccctcagg gtcccctgtc ttgcgactca gcccctgcct gcacaggagc
721 ctggaagggc tcaaccaaga gctggaggag gtatttgtga aggagcaggg agaagaggag
781 ctgctgagga tccttgatat ccctgatggg caccgggccc cagctcctcc ccagagtggc
841 agctgtgatc atcccctcct cctcctggag cctggcaacc ttgccagctc tccttccatg
901 tccttggcat ctccccagcc ttgtggcctg gccagtcatg aggaacatcg gggtgccgcc
961 gaggagctgg catccacccc caacgacaaa gcctcctctc caggacaccc agcctttctt
1021 gaagatggca gcccatctcc agtccttgcc tttgctgcct cccctcgacc taatcatagc
1081 tacatcttca aacgggagcc cccagaaggc tgtgagaaag tgcgtgtgtt tgaagaagcc
1141 acgtctccag gtcctgacct ggccttcctg acttcctgtc ctgacaagaa caaagtccat
1201 ttcaacccga ctggctcagc cttctgcccc gtcaacctga tgaagcccct cttccccggc
1261 atgggcttca tcttccgtaa ctgcccctca aacccgggat ctccccttcc cccggccagc
1321 cccaggccac cacctcggaa ggatccggaa gcctccaagg cctccccact gccattcgag
1381 ccatggcagc gcaccccacc atcagaagag cctgtgcttt tccagagctc cctgatggtc
1441 tgagggtccc acccctgccc cactttacca tagagaccag tgccttggtg gcaggtccct
1501 ccccaggtcc cctgagatgg ggtatggagg ggcccttccc tctcggcctt cgagcacttt
1561 ctttcactta ctgtgtcaaa gccctgggtc ctctttttga tgggcaccgg cccctctgaa
1621 cgtgatggga cctgccttct ccactagtag ctgggcagct cacaattcac acctgtgtac
1681 ctgccacatc cctcacttgg tggaaaacac ccagaaggtc ttgagtcccc cacccctggg
1741 tgtcagtcca aatgactgta taggaggccc ttatttttgt cacagagcaa gctggccatg
1801 aacgaaggag agaagacgcc acagatttcc ttccctctcc tccaggagac cataagatag
1861 atcccccatc ctctcagccc tattcccatg cctccctctc attggaggag ctgaccaaag
1921 cagccctaac gggccataac acttgaccaa ttcagctgct ggcagaggga ggaaacaagt
1981 gttttcccaa gtggcatttt catctcgctt tcaccctgac taaagattgt cttaagtagc
2041 agcccagccc gcccagcccc aggtgggtag tggggaggag agctggcatt cctccaggtg
2101 gcaaatggcg actctatact ctccgcccgc cccagggctg gatggattag aaaaatgcct
2161 atttttcttg tatcgatgta gagactctat tttctcccaa agacactatt tttgcagctg
2221 tttgaagttt gtatattttc cgtactgcag agcttacaca aaattgaaga atgttaatgt
2281 tcgagttttc ttatcttgtg tttagaggtt gttttttgca gatcttggtg ttaatagacc
2341 aaataaataa ataaatattc ccagcagctt gaaaaaaaaa aaaaaaaaaa aaaaaaaa
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