LOCUS BC037406 3520 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens synaptotagmin XII, mRNA (cDNA clone MGC:46295
IMAGE:5770140), complete cds.
ACCESSION BC037406
VERSION BC037406.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3520)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3520)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: p Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31342626.
FEATURES Location/Qualifiers
source 1..3520
/db_xref="H-InvDB:HIT000051916"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46295 IMAGE:5770140"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3520
/gene="SYT12"
/gene_synonym="SRG1"
/gene_synonym="SYT11"
/db_xref="GeneID:91683"
/db_xref="HGNC:HGNC:18381"
/db_xref="MIM:606436"
CDS 65..1330
/gene="SYT12"
/gene_synonym="SRG1"
/gene_synonym="SYT11"
/codon_start=1
/product="synaptotagmin XII"
/protein_id="AAH37406.1"
/db_xref="GeneID:91683"
/db_xref="HGNC:HGNC:18381"
/db_xref="MIM:606436"
/translation="MAVDVAEYHLSVIKSPPGWEVGVYAAGALALLGIAAVSLWKLWT
SGSFPSPSPFPNYDYRYLQQKYGESCAEAREKRVPAWNAQRASTRGPPSRKGSLSIED
TFESISELGPLELMGRELDLAPYGTLRKSQSADSLNSISSVSNTFGQDFTLGQVEVSM
EYDTASHTLNVAVMQGKDLLEREEASFESCFMRVSLLPDEQIVGISRIQRNAYSIFFD
EKFSIPLDPTALEEKSLRFSVFGIDEDERNVSTGVVELKLSVLDLPLQPFSGWLYLQD
QNKAADAVGEILLSLSYLPTAERLTVVVVKAKNLIWTNDKTTADPFVKVYLLQDGRKM
SKKKTAVKRDDPNPVFNEAMIFSVPAIVLQDLSLRVTVAESSSDGRGDNVGHVIIGPS
ASGMGTTHWNQMLATLRRPVSMWHAVRRN"
BASE COUNT 792 a 993 c 1119 g 616 t
ORIGIN
1 ctggagccca gccggagcgg cggcccctcc gcggagcccg gtcacagtca ctgcagcaga
61 catcatggct gtggatgtgg cagaatacca tctgagcgtc atcaagagcc cccctggctg
121 ggaggtgggt gtctatgctg caggggccct ggccctgctg ggaatcgcag ctgtgagcct
181 gtggaagctc tggacgtcgg ggagcttccc cagcccctct ccgttcccca attacgacta
241 caggtacctt cagcagaagt acggcgagag ctgcgcagag gccagggaga agagagtgcc
301 tgcctggaat gcccagcggg ccagcacgcg gggaccaccc agccgcaaag gcagtctcag
361 cattgaggac acctttgaga gcatcagtga actggggcct ctggagctga tgggccggga
421 gttggacctg gccccctatg ggaccctccg gaagtcccag tcggccgact ccctgaactc
481 catctcctcc gtgagcaaca cctttgggca ggacttcaca ctgggccagg tggaggtgag
541 catggagtac gacactgcct cccacacgct gaacgtggcg gtgatgcagg gcaaggacct
601 cctggagcgg gaggaggcca gcttcgagtc ctgcttcatg cgcgtcagcc tgctgccgga
661 cgagcagatc gtgggcattt ctcggatcca gagaaatgcc tactccatct tctttgatga
721 gaagttctcc atccccctgg atcccacagc cctggaggag aagagcctgc ggttttctgt
781 atttggcatc gatgaggatg agcgcaacgt cagcacgggg gtggtggagc tgaagctttc
841 tgtgcttgac ctcccgctgc agcccttcag tggctggctc tatttacagg accagaacaa
901 ggccgccgat gctgtggggg agatcctgct ctccctcagc tacctcccca cagccgagcg
961 cctcaccgtg gtcgtggtta aggccaagaa cctcatctgg accaacgaca agaccacagc
1021 ggaccccttc gtcaaggtgt acctgctgca ggatgggagg aagatgagca aaaagaagac
1081 agccgtgaag agggatgacc ccaacccggt gttcaacgaa gccatgatct tctcggtgcc
1141 agccattgtg ctccaggacc tgtctctccg cgtgacggtg gctgagagca gcagcgacgg
1201 ccgtggggac aacgtgggcc atgtcatcat tgggccgtca gccagtggca tgggaaccac
1261 acattggaac cagatgttgg ccacgctgcg caggcccgtg tccatgtggc acgctgtccg
1321 gcgaaactag caaccagggc gggccagttg ggcaatggag ctgctggagc ccggtaccca
1381 ctcagctctg tctgatgccc tctccatagc ccagctggag ccgtgaacac tggggtcccc
1441 tggcagagtc ctcatgaccc atcctggtct ctctgtccag attgcagcag aggagtgggc
1501 gtggctctgt gtccagggcc ccagggtctg ctcctgctga ggaccagctg tggctgggcc
1561 aggacagagg actcaaccct gctcctcccg gtaggccagc tgccgagctg ggctatgttc
1621 tggaacccag tgaatcttgg gggccaggca ctgtgctagg caccagcagg ggtaacacga
1681 agaagacccg gcccttaggg catcaggaag actagctccc ctgccccgga ggatctgctc
1741 agtgctgatg gcagcccagc tgtgtggact cagggggctc tgagggctag ggaaacagga
1801 agggcctctt tgacaaggta ggagctgtgc ttggaggggc aggaaaagaa ctgagcatgt
1861 cgcaggcagc gggcccagcc tgagcaatgg caggatgtga acttccccat cgcaaatgca
1921 gttctcagcc cactgcagtg gatacaagga agggcctttc tcggggccgg agaagagacc
1981 aagagaccag gcccgggcag cagcctaccg gccacgtgga acactggctc cggagttatt
2041 ctctgtcaaa tctactcccc ggacctcaac catggcaaga accagaggtc caaagaggcc
2101 cagacccagg tccttgtgct cagtcctgcg caaaccaggc ccagaccctg caagcatttg
2161 ttgatgccct tgcaggccca ctgggagaaa gatgcctcag gcaggtctca gcctgggggt
2221 ggcaggggtg gggcagagag aatactgaca gcagaggtct tggtgggctg cacgtgcctg
2281 cgaagatgtg gtggacaagg aggctctcgg gctgggcctt ggaggggtgg cagcggaagg
2341 acagcccagg tggctgaggc ctgatgggaa gccggggaag gccagggtgg aagggcggct
2401 tgagggacgc caggagaaga ctgaatgcca ggctaggaag gaggcggctc tcgatcacgg
2461 ggtgggtgcc cccgacaccg ggtctcctag cttgagttcc ctagaagcga aatctgagag
2521 ggggattctg gggcaagtag tttcttgcgg gtgagtgttc tcagagaaac ttaccagatc
2581 aagaaaggga gctcaggctg gatggaggaa gccacgcaag tgtggcttca agatccatcg
2641 ccttggcctg atcgctgtgg gggcaggggc ctggagtacg aggggcaccc tgggggctcc
2701 cacccagaag cagaggggct gggctgttgc acctctactg gcatcagtct ttggttaccc
2761 cccagcccca gtaggaggag agcaggcaga gcttgtcatc cccagcctgg tgtcccgcag
2821 tcccaggaag ccgcttcttg ccttcatggc tgagtgctgg gaagggctga gctcacccag
2881 gccagcaggt ggggtatcat ctgctcggtg gggccaccca caggtgacag catggaccct
2941 caggctggct gcccctgttc cttggtccat aactggtgag ctatggagac ccaggccaac
3001 aaattatccc cagtgatatg gggggaggag gggctagaac aagggcccag gggactggag
3061 gcaggatggt ggctttccct acctgacaca gccatggccc agccccaagg ccaggctgtc
3121 taccctatgg ccacagcagg aggtcagccc agggccagga gacacatggc tggacaaggc
3181 tttgcagcct gggagacccc gactttctct aacccagtgg ctgtgcggtg caggccactg
3241 actccccccc tgccctctcc cctctctccc tccccctaac tgcatgacat gttaactgtg
3301 tgcccaggac agccgtggtg gggaccgggt atgccaactg gaatgattct agaaccaaaa
3361 taaagttggg gcaggaagag ggggcttcca gggagccctg ctcggccctg aatcaccttc
3421 gtctcttctc taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3481 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//