LOCUS BC037392 2452 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens RAB interacting factor, mRNA (cDNA clone MGC:34651 IMAGE:5191960), complete cds. ACCESSION BC037392 VERSION BC037392.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2452) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2452) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-SEP-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 50 Row: k Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: GenomeScan gene prediction, Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..2452 /db_xref="H-InvDB:HIT000051910" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:34651 IMAGE:5191960" /tissue_type="Brain, adult, 6 pooled whole brains" /clone_lib="NIH_MGC_114" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2452 /gene="RABIF" /gene_synonym="MSS4" /gene_synonym="RASGFR3" /db_xref="GeneID:5877" /db_xref="HGNC:HGNC:9797" /db_xref="MIM:603417" CDS 38..409 /gene="RABIF" /gene_synonym="MSS4" /gene_synonym="RASGFR3" /codon_start=1 /product="RAB interacting factor" /protein_id="AAH37392.1" /db_xref="GeneID:5877" /db_xref="HGNC:HGNC:9797" /db_xref="MIM:603417" /translation="MEPAEQPSELVSAEGRNRKAVLCQRCGSRVLQPGTALFSRRQLF LPSMRKKPALSDGSNPDGDLLQEHWLVEDMFIFENVGFTKDVGNIKFLVCADCEIGPI GWHCLDDKNSFYVALERVSHE" BASE COUNT 670 a 574 c 507 g 701 t ORIGIN 1 cgcagccgtg gctgaggagc ctgtggcggc agcggcgatg gaaccagcgg agcagccgag 61 cgagttagtg tcagccgagg gccgaaaccg gaaggcggtg ctgtgccagc gttgcggctc 121 ccgggtgctg cagccaggga ccgctctctt ctctcgccga cagcttttcc ttccctccat 181 gagaaagaag ccagctctgt ctgacggcag caatcctgac ggcgatctcc tccaggaaca 241 ctggctggtt gaggacatgt tcatttttga gaatgtgggc ttcaccaagg acgtgggcaa 301 catcaagttt ctggtctgcg cagactgtga aattggacca attggctggc attgcctaga 361 tgacaagaac agtttctatg tggccttgga acgagtttcc catgagtaac tgaggggagg 421 ggtactcagc tccatctcca aagataaacc tactccccac aagaactggc ctttaatgtg 481 gtataactgt tccgctgcct tcttgtctgt gctaatataa atactgagta ccagcatgtc 541 catttgaaca tgcagagggt taatcctgct tcctaaagcc tcaagtacat gcctcctgct 601 tagttcactt tgtatcacat ttcctaagct cccttttccc ccagttttgg gacactgtgc 661 ttacctccaa aaatctcatc tcttccctgg cattctccct aggctctgtt ttgcccaggg 721 gctcccgctt tttcttgctc tagaagagca gtattcaacc ttttagctat gatgacacat 781 aacaaaagat gcttatgtac taatagttga aatctgcctt tttctcattc aagaaggcat 841 acaaatatct gagagtgact ttgttgtatg gctacccttg tgatctacag taatttattc 901 tttctaaaag taaagcattt tcaaaactca gtatttaaac cactaaccag aaacattact 961 ttggatgcat ctctaatacc atgtttgagc acctctgctc taggttgaga atgacatttt 1021 attgtgaaga tgggtgtggt ccctcttccc ttgaaatctt gtagtttctt tttatattag 1081 ctcctcactg ctacagccta gaaggtgaga agcagatttt aaccccatct ggcagccatt 1141 caaggaaaac ccagccctgg ctgtttactc aggctctctt agaatgagag tggagggtgt 1201 aggatatgag ggttaggcct ttgccacatt atacaaaagt ttataatttg ccacacctgg 1261 acaagtaact ttcttctttt gttcataggc aagacttctt taatggatag tatcatttac 1321 tgaacctact gggcatggtc ctcatggagt tttggttcaa ctggaatctc tgtgccaacc 1381 caggatacaa acttccatcc agatgcatgg atacaaattt ccatagctcc ggggctgctc 1441 taacagtttg atatcagcag acgtgtttaa gccttcaact tgatttccaa ttattccatc 1501 atttctattc tgaaatgact cactgtcgta gaaggaagtt tattatataa ccaaggtttc 1561 aggtatcctc ctgtcaccac ctctactatt caggaggcct aaaattgaaa taagtactaa 1621 acagaaacct taccatctga agtcccttcc attgttttct agttgcttcc tcattccttt 1681 acccccaaac tttctaaggg ctccccgact gcagtgcaag gtggccttgg gcacagtttt 1741 gcaaccaacc tactcccctg gaaagatggc ttccttctcc aattagcctg aatgagcttt 1801 agtaagcaat tgagagaact gtgtttttcc gacaaacggt cacatgtcca tcgttatggc 1861 atgtgcagaa aaacagagtt atccacacaa gtcaggagca aaacccaagt agatgcctct 1921 aggggcacat ggcccctcac atcacaagcc agaacctaag ctaagcattt tttaaattga 1981 gtttgagact agcctgggca acatggtgag accccatctc tatttaaaaa atgaacaaaa 2041 ttacctgggc atagtggtgt atgcctgtag tccctgctac ttgggaggct caggtgggag 2101 gatcacttga gccccaaaga tggtggctgc agtaagccaa gatcacacca ctggcactcc 2161 agcctgggca acagagtgag accctgtctc aaacaaacaa caacagtaac aacaaaaaaa 2221 tatatagcga cttgaatagg aaaccatagt atttcattgt tttaatttgc atttatttta 2281 tttctagtga aacttttata tacgtatcgg tcatttctat ttcctttttt gagaactgcc 2341 aaatgttgcc ctagtagcca aaaatatcag gttgctattc tgccttttca gtttgatctg 2401 aaagaaataa aggcatttaa gcaatggaaa aaaaaaaaaa aaaaaaaaaa aa //