LOCUS BC037311 3697 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens calcium channel, voltage-dependent, beta 1 subunit,
mRNA (cDNA clone MGC:41896 IMAGE:5262182), complete cds.
ACCESSION BC037311
VERSION BC037311.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3697)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3697)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 73 Row: f Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40804467.
FEATURES Location/Qualifiers
source 1..3697
/db_xref="H-InvDB:HIT000051904"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41896 IMAGE:5262182"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3697
/gene="CACNB1"
/gene_synonym="CAB1"
/gene_synonym="CCHLB1"
/gene_synonym="MGC41896"
/db_xref="GeneID:782"
/db_xref="HGNC:HGNC:1401"
/db_xref="MIM:114207"
CDS 146..1942
/gene="CACNB1"
/gene_synonym="CAB1"
/gene_synonym="CCHLB1"
/gene_synonym="MGC41896"
/codon_start=1
/product="calcium channel, voltage-dependent, beta 1
subunit"
/protein_id="AAH37311.2"
/db_xref="GeneID:782"
/db_xref="HGNC:HGNC:1401"
/db_xref="MIM:114207"
/translation="MVQKTSMSRGPYPPSQEIPMEVFDPSPQGKYSKRKGRFKRSDGS
TSSDTTSNSFVRQGSAESYTSRPSDSDVSLEEDREALRKEAERQALAQLEKAKTKPVA
FAVRTNVGYNPSPGDEVPVQGVAITFEPKDFLHIKEKYNNDWWIGRLVKEGCEVGFIP
SPVKLDSLRLLQEQKLRQNRLGSSKSGDNSSSSLGDVVTGTRRPTPPASAKQKQKSTE
HVPPYDVVPSMRPIILVGPSLKGYEVTDMMQKALFDFLKHRFDGRTSITRVTADISLA
KRSVLNNPSKHIIIERSNTRSSLAEVQSEIERIFELARTLQLVALDADTINHPAQLSK
TSLAPIIVYIKITSPKVLQRLIKSRGKSQSKHLNVQIAASEKLAQCHPEMFDIILDEN
QLEDACEHLAEYLEAYWKATHPPSSTPPNPLLNRTMATAALAASPAPVSNLQGPYLAS
GDQPLERATGEHASMHEYPGELGQPPGLYPSSHPPGRAGTLRALSRQDTFDADTPGSR
NSAYTELGDSCVDMETDPSEGPGLGDPAGGGTPPARQGSWEDEEEDYEEELTDNRNRG
RNKARYCAEGGGPVLGRNKNELEGWGRGVYIR"
BASE COUNT 756 a 1174 c 1032 g 735 t
ORIGIN
1 agcggaagga ggcagccgaa ggccgagctg ggtggctgga ccgggtgctg gctgcgccgc
61 gctgctttcg gctcccacgg cctctcccat gcgctgaggg agcccggctg ggccgggccg
121 gcggcgggag gggaggctcc tctccatggt ccagaagacc agcatgtccc ggggccctta
181 cccaccctcc caggagatcc ccatggaggt cttcgacccc agcccgcagg gcaaatacag
241 caagaggaaa gggcgattca aacggtcaga tgggagcacg tcctcggata ccacatccaa
301 cagctttgtc cgccagggct cagcggagtc ctacaccagc cgtccatcag actctgatgt
361 atctctggag gaggaccggg aagccttaag gaaggaagca gagcgccagg cattagcgca
421 gctcgagaag gccaagacca agccagtggc atttgctgtg cggacaaatg ttggctacaa
481 tccgtctcca ggggatgagg tgcctgtgca gggagtggcc atcaccttcg agcccaaaga
541 cttcctgcac atcaaggaga aatacaataa tgactggtgg atcgggcggc tggtgaagga
601 gggctgtgag gttggcttca ttcccagccc cgtcaaactg gacagccttc gcctgctgca
661 ggaacagaag ctgcgccaga accgcctcgg ctccagcaaa tcaggcgata actccagttc
721 cagtctggga gatgtggtga ctggcacccg ccgccccaca ccccctgcca gtgccaaaca
781 gaagcagaag tcgacagagc atgtgccccc ctatgacgtg gtgccttcca tgaggcccat
841 catcctggtg ggaccgtcgc tcaagggcta cgaggttaca gacatgatgc agaaagcttt
901 atttgacttc ttgaagcatc ggtttgatgg caggacctcc atcactcgtg tgacggcaga
961 tatttccctg gctaagcgct cagttctcaa caaccccagc aaacacatca tcattgagcg
1021 ctccaacaca cgctccagcc tggctgaggt gcagagtgaa atcgagcgaa tcttcgagct
1081 ggcccggacc cttcagttgg tcgctctgga tgctgacacc atcaatcacc cagcccagct
1141 gtccaagacc tcgctggccc ccatcattgt ttacatcaag atcacctctc ccaaggtact
1201 tcaaaggctc atcaagtccc gaggaaagtc tcagtccaaa cacctcaatg tccaaatagc
1261 ggcctcggaa aagctggcac agtgccaccc tgaaatgttt gacatcatcc tggatgagaa
1321 ccaattggag gatgcctgcg agcatctggc ggagtacttg gaagcctatt ggaaggccac
1381 acacccgccc agcagcacgc cacccaatcc gctgctgaac cgcaccatgg ctaccgcagc
1441 cctggctgcc agccctgccc ctgtctccaa cctccaggga ccctaccttg cttccgggga
1501 ccagccactg gaacgggcca ccggggagca cgccagcatg cacgagtacc caggggagct
1561 gggccagccc ccaggccttt accccagcag ccacccacca ggccgggcag gcacgctacg
1621 ggcactgtcc cgccaagaca cttttgatgc cgacaccccc ggcagccgaa actctgccta
1681 cacggagctg ggagactcat gtgtggacat ggagactgac ccctcagagg ggccagggct
1741 tggagaccct gcagggggcg gcacgccccc agcccgacag ggatcctggg aggacgagga
1801 agaagactat gaggaagagc tgaccgacaa ccggaaccgg ggccggaata aggcccgcta
1861 ctgcgctgag ggtgggggtc cagttttggg gcgcaacaag aatgagctgg agggctgggg
1921 acgaggcgtc tacattcgct gagaggcagg ggccacacgg cgggaggaag ggctctgagc
1981 ccaggggagg ggagggagcg aggggctcac acctgacatg tattcgcctc cagggggcgc
2041 tgtctccctc ctttcagatg cctttgctca aagcttgggg tttctttggt gttaccatcc
2101 cagctcccgg gaggccctta agccccagct gtcggttttt acctgcctgt tgtggatgga
2161 tgggggatac ccacctttct gaagtgtccc ctttctccca tcttaagggg ctctcctccc
2221 tcaccctcct agagaaaagg tgcacttcct taactctttc tactcggggc cctaagtgac
2281 ggtcctaagt gggatggctc tccttctccc aagctgcagt actggggaag ggctgggcgc
2341 ttttcctgga aagggaggcc acagattctt tcccatgggg gctctcttcc ccagacccca
2401 gatccaaggt ccctcaccct gcctgcccct tcctcccagc ttcctggcag catcgtctgg
2461 tcggtgaaag ccatagcatg gacaccccat ggggagcttg ccttggggag ggttctgggt
2521 ggaagctggc aggcatacag caccctctac cctccgtggc catggcaacg tccagggccc
2581 agaaccctga ggagtgagcg gccgagacgc tgctccccac cccccacctc catgcctcag
2641 cctttgccta ccccaggaat gagcttggcc tccaacatcc cttgcctgct gccattagta
2701 gagggggccc ctctgcatct gagcccccca tccctgtgcc acctgggtgt ggagcccatg
2761 gaacactctg gtccgcctca ttttaaacca aaaaactgct ccttcaccct caccctgagg
2821 ccccagggga gaggacccgt gggatggtgc ccaggggttg ccttgggacc tcggatctcc
2881 tctggggggc ttggctgctg ctgttgctgc tctgtatttg cctctcgtga ttctgtttgt
2941 tacccatgtt cacttccccc aggagaggcc ttggtacccc ctctcccctg gggcatccct
3001 ttgccttggc atccctgtag cccagcaacc ctgcccctcc ccagcatccc agctgggcca
3061 gagagagccg agtgtgccaa caaggactgg ggcctgcccg gctgcccgcc tcagggatgg
3121 gcacctcatg cctgtctcgc cacctcctgt gccaatgtcc caccctccac ctgggggtgg
3181 ggtgcagctt ccacttactg attagaagac accactgccc tcccttcccc cctccctgtc
3241 tggtgtcctg tgcccccatc tgtctgtcta tatttgtctg tactccccta ggagaagtat
3301 tttgccatat ataaaaccac tgtcctgtcc tttgtggctg cctcccaagc ctgcttcttt
3361 gtcctcgcca catagtcgtc agcgtaggca cctgggagct gctgatatgc acggggagtt
3421 gaaagggtgg gtgcctgaag atgttgtgcc ctgagtcatt gactcaaaag aaaagatgat
3481 cctttgattt tggccctctg atgtattgtg cccaagccag gagctgcttg ggcagtccca
3541 gctccacact ggccctgagc cccttcactt acctgtctct ccacaagtag agccaaaggc
3601 aatgggaagc tcaatgttgc tcagtgggtg agatccagac ccactggtgc aatgtcttaa
3661 atacacatga ctgtttttcc gaaaaaaaaa aaaaaaa
//