LOCUS BC037308 2241 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens YY1 transcription factor, mRNA (cDNA clone MGC:41844 IMAGE:5261384), complete cds. ACCESSION BC037308 VERSION BC037308.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2241) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2241) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-SEP-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 73 Row: e Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21464104. FEATURES Location/Qualifiers source 1..2241 /db_xref="H-InvDB:HIT000051902" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:41844 IMAGE:5261384" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2241 /gene="YY1" /gene_synonym="DELTA" /gene_synonym="NF-E1" /gene_synonym="UCRBP" /gene_synonym="YIN-YANG-1" /db_xref="GeneID:7528" /db_xref="HGNC:HGNC:12856" /db_xref="MIM:600013" CDS 113..1357 /gene="YY1" /gene_synonym="DELTA" /gene_synonym="NF-E1" /gene_synonym="UCRBP" /gene_synonym="YIN-YANG-1" /codon_start=1 /product="YY1 transcription factor" /protein_id="AAH37308.1" /db_xref="GeneID:7528" /db_xref="HGNC:HGNC:12856" /db_xref="MIM:600013" /translation="MASGDTLYIATDGSEMPAEIVELHEIEVETIPVETIETTVVGEE EEEDDDDEDGGGGDHGGGGGHGHAGHHHHHHHHHHHPPMIALQPLVTDDPTQVHHHQE VILVQTREEVVGGDDSDGLRAEDGFEDQILIPVPAPAGGDDDYIEQTLVTVAAAGKSG GGGSSSSGGGRVKKGGGKKSGKKSYLSGGAGAAGGGGADPGNKKWEQKQVQIKTLEGE FSVTMWSSDEKKDIDHETVVEEQIIGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQL AEFARMKPRKIKEDDAPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAF VESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNK KFAQSTNLKSHILTHAKAKNNQ" BASE COUNT 629 a 530 c 565 g 517 t ORIGIN 1 agcggggctt cctccctctg ccttccttcc ccacggccgg ccgcctcctc gcccgcccgc 61 ccgcagccga ggagccgagg ccgccgcggc cgtggcggcg gagccctcag ccatggcctc 121 gggcgacacc ctctacatcg ccacggacgg ctcggagatg ccggccgaga tcgtggagct 181 gcacgagatc gaggtggaga ccatcccggt ggagaccatc gagaccacag tggtgggcga 241 ggaggaggag gaggacgacg acgacgagga cggcggcggt ggcgaccacg gcggcggggg 301 cggccacggg cacgccggcc accaccacca ccaccatcac caccaccacc acccgcccat 361 gatcgctctg cagccgctgg tcaccgacga cccgacccag gtgcaccacc accaggaggt 421 gatcctggtg cagacgcgcg aggaggtggt gggcggcgac gactcggacg ggctgcgcgc 481 cgaggacggc ttcgaggatc agattctcat cccggtgccc gcgccggccg gcggcgacga 541 cgactacatt gaacaaacgc tggtcaccgt ggcggcggcc ggcaagagcg gcggcggcgg 601 ctcgtcgtcg tcgggaggcg gccgcgtcaa gaagggcggc ggcaagaaga gcggcaagaa 661 gagttacctc agcggcgggg ccggcgcggc gggcggcggc ggcgccgacc cgggcaacaa 721 gaagtgggag cagaagcagg tgcagatcaa gaccctggag ggcgagttct cggtcaccat 781 gtggtcctca gatgaaaaaa aagatattga ccatgagaca gtggttgaag aacagatcat 841 tggagagaac tcacctcctg attattcaga atatatgaca ggaaagaaac ttcctcctgg 901 aggaatacct ggcattgacc tctcagatcc caaacaactg gcagaatttg ctagaatgaa 961 gccaagaaaa attaaagaag atgatgctcc aagaacaata gcttgccctc ataaaggctg 1021 cacaaagatg ttcagggata actcggccat gagaaaacat ctgcacaccc acggtcccag 1081 agtccacgtc tgtgcagaat gtggcaaagc ttttgttgag agttcaaaac taaaacgaca 1141 ccaactggtt catactggag agaagccctt tcagtgcacg ttcgaaggct gtgggaaacg 1201 cttttcactg gacttcaatt tgcgcacaca tgtgcgaatc cataccggag acaggcccta 1261 tgtgtgcccc ttcgatggtt gtaataagaa gtttgctcag tcaactaacc tgaaatctca 1321 catcttaaca catgctaagg ccaaaaacaa ccagtgaaaa gaagagagaa gacccttctc 1381 gaccacggga agcatcttcc agaagtgtga ttgggaataa atatgcctct cctttgtata 1441 ttatttctag gaagaatttt aaaaatgaat cctacacacc taagggacat gttttgataa 1501 agtagtaaaa attaaaaaaa aaaaacttta ctaagatgac attgctaaga tgctctatct 1561 tgctctgtaa tctcgtttca aaaacacagt gtttttgtaa agtgtggtcc caacaggagg 1621 acaattcatg aacttcgcat caaaagacaa ttctttatac aacagtgcta aaaatgggac 1681 ttcttttcac attcttataa atatgaagct cacctgttgc ttacaatttt tttaattttg 1741 tattttccaa gtgtgcatat tgtacacttt tttggggata tgcttagtaa tgctacgtgt 1801 gatttttctg gaggttgata actttgcttg cagtagattt tctttaaaag aatgggcagt 1861 tacatgcata cttcaaaagt attttcctgt aaaaaaaaaa aaagttatat aggttttgtt 1921 tgctatctta attttggttg tattctttga tgttaacaca ttttgtataa ttgtatcgta 1981 tagctgtatt gaatcatgta gtatcaaata ttagatgtga tttaatagtg ttaatcaatt 2041 taaacccatt ttagtcactt tttttttcca aaaaaatact gccagatgct gatgttcagt 2101 gtaatttctt tgcctgttca gttacagaaa gtggtgctca gttgtagaat gtattgtacc 2161 ttttaacacc tgatgtgtac atcccatgta acagaaaggg caacaataaa atagcaatcc 2221 taaagcaaaa aaaaaaaaaa a //