LOCUS BC037240 1728 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens family with sequence similarity 113, member A, mRNA
(cDNA clone MGC:34669 IMAGE:5198102), complete cds.
ACCESSION BC037240
VERSION BC037240.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1728)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1728)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: p Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1728
/db_xref="H-InvDB:HIT000094759"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34669 IMAGE:5198102"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1728
/gene="FAM113A"
/gene_synonym="bA12M19.1"
/gene_synonym="DKFZp547L054"
/gene_synonym="FLJ22376"
/db_xref="GeneID:64773"
/db_xref="HGNC:HGNC:16212"
CDS 120..1484
/gene="FAM113A"
/gene_synonym="bA12M19.1"
/gene_synonym="DKFZp547L054"
/gene_synonym="FLJ22376"
/codon_start=1
/product="family with sequence similarity 113, member A"
/protein_id="AAH37240.2"
/db_xref="GeneID:64773"
/db_xref="HGNC:HGNC:16212"
/translation="MVFCLSSEEPRRPLRSDMVHFQASEVQQLLHNKFVVILGDSIQR
AVYKDLVLLLQKDSLLTAAQLKAKGELSFEQDQLVAGGQLGELHNGTQYREVRQFCSG
SGHHLVRFYFLTRVYSEYLEDVLEELTYGPAPDLVIINSCLWDLSRYGRCSMESYREN
LERVFVRMDQVLPDSCLLVWNMAMPLGERITGGFLLPELQPLAGSLRRDVVEGNFYSA
TLAGDHCFDVLDLHFHFRHAVQHRHRDGVHWDQHAHRHLSHLLLTHVADAWGVELPKR
GYPPDPWIEDWAEMNHPFQGSHRQTPDFGEHLALLPPPPSSLPPPMPFPYPLPQPSPP
PLFPPLPQDTPFFPGQPFPPHEFFNYNPVEDFSMPPHLGCGPGVNFVPGPLPPPIPGP
NPHGQHWGPVVHRGMPRYVPNSPYHVRRMGGPCRQRLRHSERLIHTYKLDRRPPAHSG
TWPG"
BASE COUNT 398 a 519 c 465 g 346 t
ORIGIN
1 gggaacatga ggcttggcta ggagcccgct gcgggccagg cgcgcggtgc gcaggcatac
61 ccgggtcgcg ggtgaacacc gcggagcccc gggacttgcc tgtcgttgct ggtggcggca
121 tggtcttctg tctgtcgagc gaggagccgc gccgcccgct gcgaagcgac atggtccact
181 tccaggcctc ggaagtccag cagctgctac acaacaagtt cgtggtcatc ttgggggact
241 ccattcagag ggctgtgtac aaggacctgg tgctcttgct ccagaaagac tcactgctca
301 cagctgccca gctgaaagcc aagggggagc tgagctttga acaggaccag ctggtggctg
361 ggggccagct gggcgagctg cacaacggga cacagtatcg tgaggtccgc cagttctgct
421 cgggctctgg ccaccacctt gtgcgcttct acttcctcac tcgtgtttac tccgagtacc
481 ttgaggatgt tctggaagag ctgacatatg gacctgcccc ggacctggtg atcatcaact
541 cctgcctctg ggatctctcc agatatggtc gctgctcaat ggagagctac cgggagaacc
601 tggagcgggt gtttgtgcgc atggaccaag tattgccaga ctcctgcctg ctggtgtgga
661 acatggcgat gcccctcggg gaacgtatca ctgggggttt cctcctgcca gagctccagc
721 ccctggcagg ctccctgcgg cgggatgtgg ttgaagggaa cttctacagt gctacgctgg
781 ccggggacca ctgctttgat gtcctagacc tccactttca cttccggcat gcagtacagc
841 accgtcatcg ggatggtgtc cactgggacc agcatgcaca ccgccacctc tcacacctgc
901 ttctgaccca tgtggctgac gcctggggcg tggagctgcc caagcgtggc tatccccctg
961 acccgtggat tgaggactgg gcagagatga atcatccatt ccagggaagc cataggcaga
1021 ccccagactt cggggagcac ctggccttgc tcccaccccc accttcttct ttgcctcctc
1081 ccatgccttt tccctacccg cttcctcagc cctcgccacc tcccctcttc ccacccctgc
1141 cccaggatac cccttttttc ccaggccagc ccttcccacc ccatgaattc ttcaactata
1201 atccagtgga ggacttctcg atgccacccc acttaggatg tggccctgga gtgaactttg
1261 tgcctggccc tctgccacct ccaatccctg gccctaatcc ccatggtcag cactggggcc
1321 cagtggtcca ccgggggatg ccacgctatg ttcctaacag cccctaccat gtgcggagaa
1381 tgggggggcc ctgcaggcag cggctcagac actcagagag actgatccac acatacaaac
1441 tggacagacg gcctcctgcc cattcgggga catggcctgg gtagactgga tcttgggctg
1501 ggactggatg tgccaatggc ccttcagggc ctgcctggca cctcaggtac tgggctaggg
1561 tgtctgctat gcctggtatt gttcttgtcc attgctgtca ccaataaagg catggaagaa
1621 caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//