LOCUS BC037227 1390 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens chromosome 19 open reading frame 48, mRNA (cDNA clone
MGC:5392 IMAGE:3446932), complete cds.
ACCESSION BC037227
VERSION BC037227.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1390)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1390)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: o Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40548383.
FEATURES Location/Qualifiers
source 1..1390
/db_xref="H-InvDB:HIT000094755"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5392 IMAGE:3446932"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1390
/gene="C19orf48"
/gene_synonym="MGC13170"
/db_xref="GeneID:84798"
/db_xref="HGNC:HGNC:29667"
CDS 621..974
/gene="C19orf48"
/gene_synonym="MGC13170"
/codon_start=1
/product="chromosome 19 open reading frame 48"
/protein_id="AAH37227.1"
/db_xref="GeneID:84798"
/db_xref="HGNC:HGNC:29667"
/translation="MTVLEAVLEIQAITGSRLLSMVPGPARPPGSCWDPTQCTRTWLL
SHTPRRRWISGLPRASCRLGEEPPPLPYCDQAYGEELSIRHRETWAWLSRTDTAWPGA
PGVKQARILGELLLV"
BASE COUNT 291 a 440 c 405 g 254 t
ORIGIN
1 ctggggtgca gcttcaagct taggaccacc caccatgcct atccaggtgc tgaagggcct
61 gaccatcact cattaagaac agaggaggct gcctgttact cctggtgttg catccctcca
121 gacactctgc tgtttcctgc ctaggcgtgg ctgcagccat ggctaggaaa gcgctgccac
181 ccacccacct gggccagagc tggttctgct cctgctgcag ggacactgag ctggctatct
241 cggcgcttcg ggcaagaact gcaacaggct ctcctgggtc ctgcaggtgt acagccgggc
301 ccctgccttg tgcctcagct ctcgagagct gctgctgccg ggtgacctga tccaacctga
361 taaggtgcca tcttcagcta ccactgcaag gccctgaggg caacagcagc acggcactgc
421 ccacccggct gctgatggcc tggtgccagc tgggagtcct cccggcactt cgaggccact
481 gagccaccct tccagcccca gcccaccatg gacaggggta tccagcttcc tcctcaacct
541 cgtcctctgc ccctgagcca gtgacgccca aggacatgcc tgttacccag gtcctgtacc
601 agcactagct ggtcaagggc atgacagtgc tggaggccgt cttggagatc caggccatca
661 ctggcagcag gctgctctcc atggtgccag ggcccgccag gccaccaggc tcatgctggg
721 acccaaccca gtgcacaagg acttggctgc tgagccacac acccaggaga aggtggataa
781 gtgggctacc aagggcttcc tgcaggctag gggaggagcc acccccgctt ccctattgtg
841 accaggccta tggggaggag ctgtccatac gccaccgtga gacctgggcc tggctctcaa
901 ggacagacac cgcctggcct ggtgctccag gggtgaagca ggccagaatc ctgggggagc
961 tgctcctggt ttgagctgca ttcaggaagt gcgggacatg gtaggggagg caaaaagcct
1021 tgggcactac cctccctgtg gagctgttcg gtgtccgtcg agctagccac accctgacac
1081 catgttcaag ggtaccggaa gagaagggtg tctgccccca acctcccctg tgggtgtcac
1141 tggccagatg tcatgaggga agcaggcctt gtgagtggac actgaccatg agtccctggg
1201 gggagtgatc ccccaggcat cgtgtgccat gttgcacttc tgcccaggca gcagggtggg
1261 tgggtaccat gggtgcccac ccctccacca catggggccc caaagcactg caggccaagc
1321 agggcaaccc cacacccttg acataaaagc atcttgaagc ttttaaaaaa aaaaaaaaaa
1381 aaaaaaaaaa
//