LOCUS BC036916 2495 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class
O, mRNA (cDNA clone MGC:46459 IMAGE:5203414), complete cds.
ACCESSION BC036916
VERSION BC036916.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2495)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2495)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 78 Row: f Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38045916.
FEATURES Location/Qualifiers
source 1..2495
/db_xref="H-InvDB:HIT000051846"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46459 IMAGE:5203414"
/tissue_type="Lung, Spleen, fetal, pooled"
/clone_lib="NIH_MGC_122"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2495
/gene="PIGO"
/gene_synonym="DKFZp434M222"
/gene_synonym="FLJ00135"
/gene_synonym="MGC20536"
/gene_synonym="MGC3079"
/gene_synonym="RP11-182N22.4"
/db_xref="GeneID:84720"
/db_xref="HGNC:HGNC:23215"
CDS 8..2026
/gene="PIGO"
/gene_synonym="DKFZp434M222"
/gene_synonym="FLJ00135"
/gene_synonym="MGC20536"
/gene_synonym="MGC3079"
/gene_synonym="RP11-182N22.4"
/codon_start=1
/product="phosphatidylinositol glycan anchor biosynthesis,
class O"
/protein_id="AAH36916.1"
/db_xref="GeneID:84720"
/db_xref="HGNC:HGNC:23215"
/translation="MQKASVLLFLAWVCFLFYAGIALFTSGFLLTRLELTNHSSCQEP
PGPGSLPWGSQGKPGACWMASRFSRVVLVLIDALRFDFAQPQHSHVPREPPVSLPFLG
KLSSLQRILEIQPHHARLYRSQVDPPTTTMQRLKALTTGSLPTFIDAGSNFASHAIVE
DNLIKQLTSAGRRVVFMGDDTWKDLFPGAFSKAFFFPSFNVRDLDTVDNGILEHLYPT
MDSGEWDVLIAHFLGVDHCGHKHGPHHPEMAKKLSQMDQVIQGLVERLENDTLLVVAG
DHGMTTNGDHGGDSELEVSAALFLYSPTAVFPSTPPEEPEVIPQVSLVPTLALLLGLP
IPFGNIGEVMAELFSGGEDSQPHSSALAQASALHLNAQQVSRFLHTYSAATQDLQAKE
LHQLQNLFSKASADYQWLLQSPKGAEATLPTVIAELQQFLRGARAMCIESWARFSLSF
LLLHLLAAGIPVTTPGPFTVPWQAVSAWALMATQTFYSTGHQPVFPAIHWHAAFVGFP
EGHGSCTWLPALLVGANTFASHLLFAVGCPLLLLWPFLCESQGLRKRQQPPGNEADAR
VRPEEEEEPLMEMRLRDAPQHFYAALLQLGLKYLFILGIQILACALAASILRRHLMVW
KVFAPKFIFEAVGFIVSSVGLLLGIALVMRVDGAVSSWFRQLFLAQQR"
BASE COUNT 560 a 704 c 643 g 588 t
ORIGIN
1 ttgcaggatg cagaaagcct cagtgttgct cttcctggcc tgggtctgct tcctcttcta
61 cgctggcatt gccctcttca ccagtggctt cctgctcacc cgtttggagc tcaccaacca
121 tagcagctgc caagagcccc caggccctgg gtccctgcca tgggggagcc aagggaaacc
181 tggggcctgc tggatggctt cccgattttc gcgggttgtg ttggtgctga tagatgctct
241 gcgatttgac ttcgcccagc cccagcattc acacgtgcct agagagcctc ctgtctccct
301 acccttcctg ggcaaactaa gctccttgca gaggatcctg gagattcagc cccaccatgc
361 ccggctctac cgatctcagg ttgaccctcc taccaccacc atgcagcgcc tcaaggccct
421 caccactggc tcactgccta cctttattga tgctggtagt aacttcgcca gccacgccat
481 agtggaagac aatctcatta agcagctcac cagtgcagga aggcgtgtag tcttcatggg
541 agatgatacc tggaaagacc ttttccctgg tgctttctcc aaagctttct tcttcccatc
601 cttcaatgtc agagacctag acacagtgga caatggcatc ctggaacacc tctaccccac
661 catggacagt ggtgaatggg acgtgctgat tgctcacttc ctgggtgtgg accactgtgg
721 ccacaagcat ggccctcacc accctgaaat ggccaagaaa cttagccaga tggaccaggt
781 gatccaggga cttgtggagc gtctggagaa tgacacactg ctggtagtgg ctggggacca
841 tgggatgacc acaaatggag accatggagg ggacagtgag ctggaggtct cagctgctct
901 ctttctgtat agccccacag cagtcttccc cagcacccca ccagaggagc cagaggtgat
961 tcctcaagtt agccttgtgc ccacgctggc cctgctgctg ggcctgccca tcccatttgg
1021 gaatatcggg gaagtgatgg ctgagctatt ctcagggggt gaggactccc agccccactc
1081 ctctgcttta gcccaagcct cagctctcca tctcaatgct cagcaggtgt cccgatttct
1141 tcatacctac tcagctgcta ctcaggacct tcaagctaag gagcttcatc agctgcagaa
1201 cctcttctcc aaggcctctg ctgactacca gtggcttctc cagagcccca agggggctga
1261 ggcgacactg ccgactgtga ttgctgagct gcagcagttc ctgcggggag ctcgggccat
1321 gtgcatcgag tcttgggctc gtttctctct gagcttcctt ctcctacatc tgcttgctgc
1381 tgggataccc gtcaccaccc ctggtccttt tactgtgcca tggcaggcag tctcggcttg
1441 ggccctcatg gccacacaga ccttctactc cacaggccac cagcctgtct ttccagccat
1501 ccattggcat gcagccttcg tgggattccc agagggtcat ggctcctgta cttggctgcc
1561 tgctttgcta gtgggagcca acacctttgc ctcccacctc ctctttgcag taggttgccc
1621 actgctcctg ctctggcctt tcctgtgtga gagtcaaggg ctgcggaaga gacagcagcc
1681 cccagggaat gaagctgatg ccagagtcag acccgaggag gaagaggagc cactgatgga
1741 gatgcggctc cgggatgcgc ctcagcactt ctatgcagca ctgctgcagc tgggcctcaa
1801 gtacctcttt atccttggta ttcagattct ggcctgtgcc ttggcagcct ccatccttcg
1861 caggcatctc atggtctgga aagtgtttgc ccctaagttc atatttgagg ctgtgggctt
1921 cattgtgagc agcgtgggac ttctcctggg catagctttg gtgatgagag tggatggtgc
1981 tgtgagctcc tggttcaggc agctatttct ggcccagcag aggtagccta gtctgtgatt
2041 actggcactt ggctacagag agtgctggag aacagtgtag cctggcctgt acaggtactg
2101 gatgatctgc aagacaggct cagccatact cttactatca tgcagccagg ggccgctgac
2161 atctaggact tcattattct ataattcagg accacagtgg agtatgatcc ctaactcctg
2221 atttggatgc atctgaggga caaggggggc ggtctccgaa gtggaataaa ataggccggg
2281 cgtggtgact tgcacctata atcccagcac tttgggaggc agaggtggga ggattgcttg
2341 gtcccaggag ttcaagacca gcctgtggaa cataacaaga ccccgtctct actatttaaa
2401 aaaaagtgta ataaaatgat aatataatta aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2461 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//