LOCUS BC036867 2424 bp mRNA linear HUM 03-NOV-2006
DEFINITION Homo sapiens chromosome 5 open reading frame 34, mRNA (cDNA clone
MGC:46448 IMAGE:5198039), complete cds.
ACCESSION BC036867
VERSION BC036867.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2424)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2424)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 78 Row: f Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38348407.
FEATURES Location/Qualifiers
source 1..2424
/db_xref="H-InvDB:HIT000051833"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46448 IMAGE:5198039"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2424
/gene="C5orf34"
/gene_synonym="FLJ32363"
/gene_synonym="MGC46448"
/db_xref="GeneID:375444"
/db_xref="HGNC:HGNC:24738"
CDS 266..2182
/gene="C5orf34"
/gene_synonym="FLJ32363"
/gene_synonym="MGC46448"
/codon_start=1
/product="chromosome 5 open reading frame 34"
/protein_id="AAH36867.1"
/db_xref="GeneID:375444"
/db_xref="HGNC:HGNC:24738"
/translation="MAAELRMILYEDDSVQVQYVDGSTLQLSPCGSEFLFEKSPPVSA
HPLEQPERIRQRTHFVISTYREQLQRALDFRNSSATCPFLSETIIPSERKKHIFIDIT
EVRWPSLDTDGTMIYMESGIVKITSLDGHAYLCLPRSQHEFTVHFLCKVSQKSDSSAV
LSETNNKAPKDKLVEKTGKICIRGNLPGQRLKNKENEFHCQIMKSKETLKKMSCVNGT
EGREELPSPGTKHTCVYTWVKQCWSVAACPEEWKYPLSLALHFHNKISNMSKIDAHIT
QSRFLTSDISEERGKVVSVLPRALSLSCPVPHLHRWNFCDSLLQRQSDEYSYPELVKM
VWYKGVTYRLTHQNMNSIEIYSGDGSVFKSEGAYFGNYFTYYSIQEGSGKREEKTYSV
NNLPPDRPGSPFTVGSLIKQATRILQHCVKMRLSLSHNYRICCWKMVPGINDSNILPL
VLKESLIPSVGRFLAYSDDKVHAIFLDGITLTLNWNFSSPIEKRQVNQGLNLGWCKLT
FPDGQEQLIQIEHPEPYERYVTTVTSWCRRLTQTSPREMPTHSSSSVLQENWSVASEL
EKIQKFNLLLENSGILNQISNKKNEQQSFDHYKPGSSETLLGEVNENRVSIALKKTSE
ILHDIDCLLSNSKK"
BASE COUNT 803 a 450 c 462 g 709 t
ORIGIN
1 cgggcatctt ggccaaaaca ctctccctgc caccttattc ctctagggtt gtgatttttt
61 tctttcacca agaaatatca ctcgctggta atttgtcaaa ctgaagaaac ccctgaagaa
121 gcagtggtgg gcaggcgccg acgctgcggc ttccagagca ttttggcaaa tcaaagccag
181 ggaccgttgc tgggcctcat ttccgcaact tttcggctcc gaactgcttc tttgacttag
241 aaggatatct tatcctgccg ttgtaatggc agctgaactg cgaatgatac tttatgaaga
301 tgattcagta caagtacaat atgttgatgg ttccacattg caactttctc cctgtggctc
361 tgaattttta tttgaaaagt caccacctgt ttcagcacat cctttagaac aaccagaaag
421 aattcgtcaa aggacacatt ttgtcattag cacttacaga gagcaactac agcgagccct
481 agattttcga aactcttcag ctacttgccc ttttttatct gaaaccatca taccttctga
541 aagaaaaaag catatcttca ttgacataac agaagtgaga tggcccagtc ttgatacgga
601 tggtaccatg atatatatgg agagtggcat tgtgaagata acatctttag atggtcatgc
661 atacctctgc ctgcccagat ctcagcatga atttacagta cattttttgt gtaaagttag
721 ccagaagtca gactcatctg cagtgttgtc agaaacaaat aataaagccc caaaagataa
781 actagttgaa aaaactggca aaatctgtat acgtggaaat ttaccaggac agagactgaa
841 gaataaagaa aatgagtttc attgccagat catgaaatcc aaagaaactt taaagaagat
901 gagttgtgta aatggaactg aagggaggga agagctgcct tcgcctggta caaagcacac
961 atgtgtatac acatgggtca agcagtgctg gtctgtggct gcctgtccag aggaatggaa
1021 atatcctttg tctttagcac ttcattttca taataaaatc agcaatatgt ctaaaattga
1081 tgcacatata actcagagta gatttttaac ttctgatatt tcagaggaaa gaggaaaagt
1141 ggtttctgtt cttcccaggg ccctgtcact cagctgtcca gtcccacacc tacacaggtg
1201 gaatttttgt gattcacttt tacagagaca atctgatgaa tattcctatc ctgaactagt
1261 gaaaatggtt tggtacaaag gtgttacata tagacttacc catcaaaata tgaactcaat
1321 agagatttat tctggggatg gatctgtttt caaatcagaa ggggcttatt ttgggaacta
1381 ttttacttat tattctattc aagaaggatc aggaaagaga gaagagaaaa cttactcagt
1441 aaataacctt cctccagata gaccgggaag tccattcact gtcggttctc taattaaaca
1501 ggcaacaaga attcttcaac attgtgtgaa gatgagactt tctttaagcc ataactatcg
1561 tatatgctgc tggaaaatgg tacctgggat aaatgatagc aatatactgc ctttggtttt
1621 gaaagagtca ctcataccca gtgtgggaag atttcttgcc tactctgatg acaaagtaca
1681 tgctatcttt ttagatggca ttactctaac cctaaattgg aatttcagct ctcctattga
1741 gaagagacag gtaaatcaag gtcttaactt aggttggtgt aagttaactt ttcctgatgg
1801 acaagagcag ttaattcaga ttgaacaccc tgaaccatat gaaagatatg tgacaacagt
1861 aacatcatgg tgcaggagac tgacccagac tagtcccaga gagatgccca ctcattcgtc
1921 atcttctgtt ctccaagaaa attggtctgt tgcttctgaa cttgaaaaga tacagaagtt
1981 taacttgcta ctagaaaata gtggtatcct aaaccagatt tctaacaaga aaaatgaaca
2041 acagtctttt gatcattata aaccaggatc ttcagaaacc ttgctaggag aagttaatga
2101 aaatagagta tcaatagcat tgaaaaaaac ctctgaaatc cttcacgata ttgactgtct
2161 tctatcaaac tctaaaaagt gaaaaatgga attattacaa catattatta aagtttaagg
2221 atgttgtttc aagtgactgg tataaaatta ctagtaagcc aagatattgt acgtattacc
2281 ccggcacaat gattgtgaaa gaactgacat ttaactttga aggtattttt aacttgtaca
2341 tttttaaaat atgtatttat atcttaataa taaatatttc gaagttttga acgttaaaaa
2401 aaaaaaaaaa aaaaaaaaaa aaaa
//