LOCUS BC036844 1403 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens SPT2, Suppressor of Ty, domain containing 1 (S.
cerevisiae), mRNA (cDNA clone IMAGE:5229445), partial cds.
ACCESSION BC036844
VERSION BC036844.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1403)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1403)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 78 Row: i Column: 4.
FEATURES Location/Qualifiers
source 1..1403
/db_xref="H-InvDB:HIT000094650"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5229445"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1403
/gene="SPTY2D1"
/gene_synonym="FLJ39441"
/db_xref="GeneID:144108"
/db_xref="HGNC:HGNC:26818"
/db_xref="IMGT/GENE-DB:26818"
/db_xref="MIM:26818"
CDS <1..894
/gene="SPTY2D1"
/gene_synonym="FLJ39441"
/codon_start=1
/product="SPTY2D1 protein"
/protein_id="AAH36844.1"
/db_xref="GeneID:144108"
/db_xref="HGNC:HGNC:26818"
/db_xref="IMGT/GENE-DB:26818"
/db_xref="MIM:26818"
/translation="PTVSSGPVPRRQNGSSSSGPERSISGSKKPTNDSNPSRRTVSGT
CGPGQPASSSGGPGRPISGSVSSARPLGSSRGPGRPVSSPHELRRPVSGLGPPGRSVS
GPGRSISGSIPAGRTVSNSVPGRPVSSLGPGQTVSSSGPTIKPKCTVVSETISSKNII
SRSSNGQMNGMKPPLSGYRAAQGPQRLPFPTGYKRQREYEEEDDDDDEYDSEMEDFIE
DEGEPQEEISRHIREIFGYDRKKYKDESDYALRYMESSWKEQQKEEAKSLRLGMQEDL
EEMRREEEEMQRRRAKKLKRR"
BASE COUNT 415 a 304 c 343 g 341 t
ORIGIN
1 cccacagtta gttctggccc tgtgcctagg cgccagaatg gcagctccag ctcaggacct
61 gagcgatcaa tcagtgggtc caagaagcca accaatgact caaatccctc taggcggaca
121 gtcagtggta catgtggccc tggacaacct gcaagcagct caggtggccc tgggcgaccc
181 atcagtggtt cagttagttc tgcaagaccc ttgggcagct ctcgtggccc tggccggcct
241 gtgagcagtc cacatgaact tcgacgacca gtgagtggct tgggcccccc ggggcggtct
301 gtcagtggcc ctgggagatc cataagtggc tcaattccag ctggacggac tgtcagtaat
361 tcagtcccag gaagaccagt gagcagcttg ggacctgggc aaacagttag tagctcaggt
421 cccactataa agcctaagtg cactgttgtc tccgaaacaa tttcttccaa gaatatcatt
481 agccggtcca gcaatggaca gatgaatgga atgaagcctc ccctatctgg ctacagagct
541 gcccaaggtc ctcaaaggct tcccttccct actggttaca aaaggcagcg agaatatgaa
601 gaggaagatg acgatgatga tgaatacgac tctgaaatgg aagattttat tgaagatgaa
661 ggagagcctc aggaagaaat atccaggcac attagagaaa tctttggtta tgaccgaaaa
721 aaatacaaag atgaaagtga ttatgcctta cgttacatgg aaagtagttg gaaagagcag
781 cagaaggaag aagcaaagag cttaagactg ggtatgcaag aggacttaga ggaaatgaga
841 cgtgaagaag aagaaatgca acgtcgaagg gccaagaagc tgaagaggcg ttagctgctg
901 cttttatttt tgtgaaattc tagagctgct ctgctgcaag gatttcctgc cttcagactg
961 aagaagcccc cttatcattt tagatttata cttgggtact caaggagaag gaatgcatac
1021 tgtcatttgc aggctgtcat ttgagcataa aatattttca gatattttcc agggtgaaat
1081 ctgtaatgca gatgatataa tgcccacttg tgctcttatg aagttaactg ttcacagatg
1141 ccagccttga tcctgatgag ctatgcactc taatgtgggg ccactcacca gtcagccaat
1201 cttttattgt tcctttgcta ctttgaaagg aaaaaaaagg ttgtctcttg atttctgtaa
1261 ttcttctgct gatctgtgag tagggcactg ccctgctccc aatcaaactt agtcttttta
1321 tgagaaacct ggaccttcca tgaatgttgc cagcaataaa gtgacttgtc ctaaaaaaaa
1381 aaaaaaaaaa aaaaaaaaaa aaa
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